CDS Information : KRH_09540

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Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	1,035,719 / 1,036,150 / +
Location	1035719..1036150
Type	CDS
Length	432 bp (143 aa)

Product	HIT family protein
Gene name
Functional category	Unclassified - uncharacterized protein
EC number
Note
KEGG pathway
Sequence feature
References	Uniprot:P49776 Pubmed:8554540

UniProt	B2GLW0
INSD	BAG29301.1 (DDBJ GenBank EMBL)
UniParc	UPI0001733F39

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=3e-38 A1R7Y0_ARTAT Putative histidine triad protein HIT domain Alignment 2 E=1e-37 A0JY92_ARTS2 Histidine triad (HIT) protein Alignment 3 E=2e-35 YHI1_MYCTU Uncharacterized HIT-like protein Rv0759c/MT0784 Alignment 4 E=2e-35 A2VG62_MYCTU Putative uncharacterized protein Alignment 5 E=2e-35 YHI1_MYCBO Uncharacterized HIT-like protein Mb0782c Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR001310 Histidine triad (HIT) protein (Family) PTHR23089   HISTIDINE TRIAD (HIT) PROTEIN PF01230   HIT PIRSF000714   Histidine triad hydrolase PR00332   HISTRIAD PS51084   HIT_2 IPR011146 Histidine triad-like motif (Domain) SSF54197   HIT-like IPR011151 Histidine triad motif (Domain) G3DSA:3.30.428.10   no description
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	143 amino acids
molecular mass	16,008.21 Da
pI	4.97
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 10.5 (15aa) 10.5 (15aa) 7.7 (11aa) 5.6 (8aa) 4.9 (7aa) 2.1 (3aa) 6.3 (9aa) 2.8 (4aa) 4.9 (7aa) 5.6 (8aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.2 (6aa) 0.7 (1aa) 2.1 (3aa) 4.2 (6aa) 0 (0aa) 1.4 (2aa) 4.2 (6aa) 7.7 (11aa) 6.3 (9aa) 8.4 (12aa)

>KRH_09540 HIT family protein
GTGAGCTCAGTGTTCACCAAGATCATCGAGGGCGAGCTGCCCGGCCGCTTCGTCTGGGCC
GACGAACAGTGCGTCGCGTTCCTGTCCATCCAGCCGCTCGCCCAGGGCCACGTGCTCGTG
GTCCCGCGCCGGGAGGTGGACGCGTGGATCAACCTCCCCGAGGAGTTGGCCACCCATCTC
ATGACGGTGTCCCGGGCCATCGGCCGGGCTGTGGACGCCGCCTTCTCCCCGAAGCGCGTG
GGCCTCATGATCCAGGGCTTCGAGGTGCCCCACACCCACCTGCACGTGTGGCCCACCAAC
TCGATCGAGGAGTTCGACTTCGCGAACGTGGACCGGGACCCGGACGCCGCGCTCATGGAC
GAGTCCGCCCGCCGGATCCGCGAGGCACTCGTGGCCCAGGGTCACGAGGACACGGTGCCG
TCGCAGCGCTGA


>KRH_09540 HIT family protein
MSSVFTKIIEGELPGRFVWADEQCVAFLSIQPLAQGHVLVVPRREVDAWINLPEELATHL
MTVSRAIGRAVDAAFSPKRVGLMIQGFEVPHTHLHVWPTNSIEEFDFANVDRDPDAALMD
ESARRIREALVAQGHEDTVPSQR

NBRC No.	clone name	start	stop	length(bp)
G09-002-027	MDFO1S8501I13	1,022,894	1,068,201	45,308

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.