small fontnormal fontlarge fontmail to

CDS Information : KRH_10210

close allopen/close all

close this sectionGenomic map

Display Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome

 Legend Jump
Overview 
Genome
Clone

close this sectionLocation

Organism Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon chromosome
Start / Stop / Direction 1,111,797 / 1,113,674 / +
Location 1111797..1113674
Type CDS
Length 1,878 bp (625 aa)

close this sectionAnnotation

Product acetolactate synthase large subunit
Synonym: acetohydroxyacid synthase
Gene name ilvB
Functional category Metabolism
- Amino Acid Metabolism
EC number 2.2.1.6
Note
KEGG pathway map:00650 KO:K01652
map:00290 KO:K01652
Sequence feature
References Uniprot:P42463 Pubmed:8366043

close this sectionRelated links to external database

UniProtB2GFJ5
INSDBAG29368.1 (DDBJ GenBank EMBL)
UniParcUPI0001733EFE

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=0A0JXZ8_ARTS2Acetolactate synthase, large subunitAlignment
2E=0A1R7M1_ARTATAcetolactate synthase, large subunit, biosynthetic typeAlignment
3E=0A3TR46_9MICOAcetolactate synthase I large subunitAlignment
4E=0A6W7N4_KINRAAcetolactate synthaseAlignment
5E=0Q6AEP0_LEIXXAcetolactate synthaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR000399 TPP-binding enzymes, conserved site (Conserved_site)
 [472-491]  PS00187
PS00187   TPP_ENZYMES
IPR000399 TPP-binding enzymes (Family)
 [48-606]  4.4e-226 PIRSF001370
PIRSF001370   Thiamine diphosphate-dependent enzyme, acetolactate synthase type
 [472-491]  PS00187
PS00187   TPP_ENZYMES
IPR004407 Acetolactate synthase, large subunit, biosynthetic type (Family)
 [46-618]  PIRSF500108
PIRSF500108   Acetolactate synthase, large subunit
IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding (Domain)
 [435-590]  1.1e-80 PF02775
PF02775   TPP_enzyme_C
IPR012000 Thiamine pyrophosphate enzyme, central region (Domain)
 [236-371]  6.6e-68 PF00205
PF00205   TPP_enzyme_M
IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP binding region (Domain)
 [46-216]  8.9e-97 PF02776
PF02776   TPP_enzyme_N
IPR012846 Acetolactate synthase, large subunit, biosynthetic (Family)
 [46-615]  1.3e-292 TIGR00118
TIGR00118   acolac_lg: acetolactate synthase, large sub
 [276-611]  2.3e-164 PTHR18968:SF13
PTHR18968:SF13   ACETOLACTATE SYNTHASE
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 625 amino acids
molecular mass 67,050.66 Da
pI 4.58
aa composition
AlaValLeuIlePheTrpProMetGlySer
12.3
(77aa)		8.3
(52aa)		7.4
(46aa)		5.1
(32aa)		2.1
(13aa)		1.4
(9aa)		6.4
(40aa)		3.5
(22aa)		8.2
(51aa)		5.4
(34aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
7.2
(45aa)		0.8
(5aa)		2.6
(16aa)		5.4
(34aa)		2.2
(14aa)		1.8
(11aa)		2.4
(15aa)		5.4
(34aa)		7.4
(46aa)		4.6
(29aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G09-001-048 MDFO1S8502O23 1,087,471 1,121,669 34,199
G09-002-028 MDFO1S8502F18 1,110,843 1,154,649 43,807

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.