CDS Information : KRH_10270

Display	1000bp 10000bp 100000bp Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	1,119,830 / 1,120,609 / +
Location	1119830..1120609
Type	CDS
Length	780 bp (259 aa)

Product	fumarylacetoacetate hydrolase family protein
Gene name
Functional category	Unclassified - uncharacterized protein
EC number
Note
KEGG pathway
Sequence feature
References	Family/Domain:IPR002529 Uniprot:Q46978 Pubmed:8550403 Uniprot:P37352 Pubmed:8223600 Uniprot:Q5SK43 Pubmed:17768357

UniProt	B2GFK1
INSD	BAG29374.1 (DDBJ GenBank EMBL)
UniParc	UPI0001733F3B

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=2e-90 A1R7K7_ARTAT Putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase Alignment 2 E=9e-90 A0JXY6_ARTS2 5-carboxymethyl-2-hydroxymuconate delta-isomerase Alignment 3 E=1e-82 A1SM04_NOCSJ 5-carboxymethyl-2-hydroxymuconate delta-isomerase Alignment 4 E=9e-82 A3TR79_9MICO Putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase Alignment 5 E=5e-80 A6W7Q3_KINRA Fumarylacetoacetate (FAA) hydrolase Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR002529 Fumarylacetoacetase, C-terminal-like (Domain) PF01557   FAA_hydrolase IPR002529 Fumarylacetoacetate (FAA) hydrolase (Family) PF01557   FAA_hydrolase IPR011234 Fumarylacetoacetase, C-terminal-related (Domain) G3DSA:3.90.850.10   no description SSF56529   FAH
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	259 amino acids
molecular mass	28,018.62 Da
pI	4.4
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 8.1 (21aa) 12 (31aa) 8.1 (21aa) 3.5 (9aa) 2.7 (7aa) 1.2 (3aa) 6.6 (17aa) 1.9 (5aa) 9.3 (24aa) 5.4 (14aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 7.7 (20aa) 1.5 (4aa) 2.3 (6aa) 2.7 (7aa) 2.7 (7aa) 1.9 (5aa) 1.5 (4aa) 6.6 (17aa) 6.2 (16aa) 8.1 (21aa)

>KRH_10270 fumarylacetoacetate hydrolase family protein
GTGTGCATGCGCATCGCACGGTTCACACACGACAACGAGATCCACTACGGCACCGTCCAC
GGGGAGCCCGGGCAGGAGACCCTGCGCTACCTCTCGGGGGACCCGCTCTACGTGGGGGTC
CAGGAGGTCGAACGCACCGTGGCGGTCTCCGAGGCCCGGCTGCTGGCCCCGGTGATCCCG
CGCTCCAAGATCGTGTGCGTGGGCCGCAACTACGCCGAGCACGCGGCCGAGATGGGCAAC
GACGTCCCCACCCGGCCCCTGCTGTTCTTCAAGCCCAACACCGCCGTCTCCGGCCCGGGG
GACCCGGTCACGCTGCCGGCGTGGACCGAGGAGGTCTCCTACGAGGCCGAGCTGGCCGTG
GTGATCGGGCGCATGTGCAAGGACGTGCCCGTGGAGCGCGTGCCCGAGGTCGTCTTCGGC
TACACGGCCGCGAACGACCTCACCGCCCGCGACGCCCAGCGCAGCGACGGGCAGTGGGCC
CGGGCCAAGGGCTTCGACGGCGCGTGCCCGCTGGGCCCGTGGGTGGAGACCGAGCTGGAC
ACCTCCGCGCTGTCCGTGCGCTCGTCCGTGAACGGTGAGCTCAAGCAGGACGGCAGCACC
CAGGACATGATCTTCGACGTCCCCACACTGGTCTCCTACGTGTCCGAGGCGTTCACGCTG
CTGCCCGGGGACGTGATCCTCACCGGGACCCCGGCCGGGGTGGGCACCGTGGACGAGGGG
GACCGGCTCTCGGTGCAGATCGAGGGGATCGGCGAGCTCACCACCGTGCTGCGCCGGTAG


>KRH_10270 fumarylacetoacetate hydrolase family protein
MCMRIARFTHDNEIHYGTVHGEPGQETLRYLSGDPLYVGVQEVERTVAVSEARLLAPVIP
RSKIVCVGRNYAEHAAEMGNDVPTRPLLFFKPNTAVSGPGDPVTLPAWTEEVSYEAELAV
VIGRMCKDVPVERVPEVVFGYTAANDLTARDAQRSDGQWARAKGFDGACPLGPWVETELD
TSALSVRSSVNGELKQDGSTQDMIFDVPTLVSYVSEAFTLLPGDVILTGTPAGVGTVDEG
DRLSVQIEGIGELTTVLRR

NBRC No.	clone name	start	stop	length(bp)
G09-001-048	MDFO1S8502O23	1,087,471	1,121,669	34,199
G09-002-028	MDFO1S8502F18	1,110,843	1,154,649	43,807

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.