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CDS Information : KRH_10520

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Kocuria rhizophila DC2201 (= NBRC 103217) chromosome

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Overview 
Genome

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Organism Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon chromosome
Start / Stop / Direction 1,150,517 / 1,149,492 / -
Location complement(1149492..1150517)
Type CDS
Length 1,026 bp (341 aa)

close this sectionAnnotation

Product putative 3-oxoacyl-[acyl-carrier-protein] synthase III
Synonym: beta-ketoacyl-ACP synthase III
Gene name
Functional category Metabolism
- Lipid Metabolism
EC number 2.3.1.180
Note
KEGG pathway map:00061 KO:K00648
Sequence feature
References Uniprot:P0A6R0 Pubmed:1551888,11078736,10673437

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UniProtB2GFM6
INSDBAG29399.1 (DDBJ GenBank EMBL)
UniParcUPI0001733F83

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=1e-108A1R681_ARTATPutative 3-oxoacyl-[ACP] synthase IIIAlignment
2E=1e-100A5CT00_CLAM3Putative 3-oxoacyl-[acyl-carrier-protein] synthaseAlignment
3E=3e-99A6W8M9_KINRA3-Oxoacyl-(Acyl-carrier-protein (ACP)) synthase III domain proteinAlignment
4E=9e-87A4A9J6_9GAMM3-oxoacyl-[acyl-carrier-protein] synthase IIIAlignment
5E=3e-65A6G0Q4_9DELT3-oxoacyl-(Acyl carrier protein) synthaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (Domain)
 [254-339]  8.8e-10 PF08541
PF08541   ACP_syn_III_C
IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III (Domain)
 [123-219]  1.2e-08 PF08545
PF08545   ACP_syn_III
IPR016038 Thiolase-like, subgroup (Domain)
 [54-209]  7.4e-16 G3DSA:3.40.47.10
G3DSA:3.40.47.10   no description
IPR016039 Thiolase-like (Domain)
 [17-207]  3.2e-30 SSF53901 [211-341]  2.5e-20 SSF53901
SSF53901   Thiolase-like
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 341 amino acids
molecular mass 36,595.33 Da
pI 4.81
aa composition
AlaValLeuIlePheTrpProMetGlySer
12.9
(44aa)
7.6
(26aa)
9.7
(33aa)
4.7
(16aa)
2.9
(10aa)
2.1
(7aa)
4.1
(14aa)
2.3
(8aa)
10
(34aa)
4.7
(16aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
7
(24aa)
1.2
(4aa)
3.8
(13aa)
1.8
(6aa)
1.2
(4aa)
1.2
(4aa)
2.6
(9aa)
7.3
(25aa)
5.6
(19aa)
7.3
(25aa)

open this sectionSequence