CDS Information : KRH_11040

Display	1000bp 10000bp 100000bp Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	1,214,740 / 1,212,161 / -
Location	complement(1212161..1214740)
Type	CDS
Length	2,580 bp (859 aa)

Product	aminopeptidase N
Gene name	pepN
Functional category	Environmental Information and Cellular Processing - Others
EC number	3.4.11.2
Note
KEGG pathway	map:00480 KO:K01256
Sequence feature
References	Family/Domain:IPR012778 Merops:M01 Uniprot:Q11010 Pubmed:7909302

UniProt	B2GGB1
INSD	BAG29451.1 (DDBJ GenBank EMBL)
UniParc	UPI0001734063

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=0 A1R7A8_ARTAT Aminopeptidase N Alignment 2 E=0 A0JXL9_ARTS2 Aminopeptidase N. Metallo peptidase. MEROPS family M01 Alignment 3 E=0 A6WDU9_KINRA Aminopeptidase N Alignment 4 E=0 Q6AFS4_LEIXX Aminopeptidase N Alignment 5 E=0 A5CQZ8_CLAM3 PepN protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR001930 Peptidase M1, membrane alanine aminopeptidase (Family) PR00756   ALADIPTASE PF01433   Peptidase_M1 PTHR11533   PROTEASE M1 ZINC METALLOPROTEASE IPR006025 Peptidase M, neutral zinc metallopeptidases, zinc-binding site (Binding_site) PS00142   ZINC_PROTEASE IPR012778 Peptidase M1, aminopeptidase N actinomycete-type (Family) TIGR02412   pepN_strep_liv: aminopeptidase N PTHR11533:SF12   AMINOPEPTIDASE N IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal (Domain) PR00756   ALADIPTASE PF01433   Peptidase_M1
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	859 amino acids
molecular mass	94,925.65 Da
pI	4.39
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 12.9 (111aa) 8.8 (76aa) 8.7 (75aa) 2 (17aa) 5 (43aa) 2.2 (19aa) 4.3 (37aa) 1.4 (12aa) 6.3 (54aa) 5.6 (48aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 7.5 (64aa) 0.5 (4aa) 2.2 (19aa) 5.1 (44aa) 2.4 (21aa) 1.3 (11aa) 2.1 (18aa) 7 (60aa) 7.1 (61aa) 7.6 (65aa)

>KRH_11040 aminopeptidase N
GTGCCCGGAACCAACCTGACCCGTGCGGAGGCCGCAGAACGCGCGCAGACCCTGGCGGTC
GAGTCCTATCGGGTGGCACTGGAGCTCACCGGGGATCCGGAGACCTTCCGCGTGCACACC
ACGGTGGACTTCACCGCCACCCCGGGCAGCAGCTCGTTCATCGACGCCATCACGGCCTCG
GTGGAGTCCGTGACCCTCAACGGCGCGTCCCTGGACCCCGCCGAGGTCAGCGACGGTGAG
CGGATCCAGCTGCCGGGCCTCGCGCAGCGCAACGAGCTGGTGGTCGAGTCCACCATGCGC
TACATGAACACGGGCGAGGGCCTGCACCGCTTCGTGGACCCCGCGGACGGGCAGGTGTAC
CTCTACTCGCAGTTCGAGGTCGCGGACACCCGGCGGATGTTCCCGGTGTTCGAGCAGCCG
GACCTGAAGGCCACGTTCCAGTTCTCCGTGACCGCCCCCGCCGACTGGGCGGTGGTGTCC
AACCAGCCGAGCCCCGAGCCGGTGGCCGTGTCCGACGGCGTGGCCCGCTGGGACTTCTCC
CCCACCCCGGTGATGTCCTGCTACGTGACCGCGCTGATCGCGGGCCCGTACGTGAGCACC
CACGACAGCCTGGTCTCCTCGGACGGGCGCACCATCGAGCTGGGCCTGTTCGCCCGCCGC
TCCCTGTTCGAGTACGTGGACGCCGAGGAGATGTTCGAGGTCACCAAGCAGGGCTTCGAG
TTCTTCGAGTCCCAGTTCGGGGTGCCCTACCCCTTCGAGAAGTACGACCAGCTCTTCGTG
CCGCAGTTCAACGCCGGCGCCATGGAGAACGCGGGCGCGGTGACGTTCGTGGAGTCCTAC
ATCTTCCGCTCCAAGCCGGCGCAGGCCCGCGTGGAGCGCCGCGCGATCACCGTGCTGCAC
GAGCTGGCGCACATGTGGTTCGGGGACCTCGTGACCATGCGCTGGTGGAACGACCTGTGG
CTCAACGAGTCCTTCGCCGAGTACATGTCCACCCTGGCGTGCGCGCAGAACACCCGGTAC
ACCAACGCGTGGACCACGTTCGCGGCCGGGGAGAAGTCCTGGGGCTACGAGCAGGACCAG
CTGCCCACCACCCACCCCATCAAGGCCGAGATCCCGGACCTCGAGGCGGTGCTCGTGAAC
TTCGACGGCATCACCTACGCCAAGGGCGCCTCGGTGCTCAAGCAGCTCGTGGCCTGGGTG
GGCCAGGATGAGTTCATGGCGGGGCTCAACCGCTACTTCGGCAAGCACGCGTGGTCCAAC
ACGGAGCTCTCGGACCTCATGGTCGAGCTCGAGGCGGCCAGCGGGCGCGACCTCACCGAC
TGGTCCGCACGCTGGCTCGAGACCGCGGGCGTGAACACCCTGGTGCCGCGGGTCGAGGCC
GACGACGACGGCGTCATCACGTCCTTCCGCATCGAGCAGCTGGGCCAGGAGGGCCACCCC
ACCCTGCGGCCCCACCGCGTGGCCGTGGGCTTCTACGACCACCGCGAGGACACCGGGCTG
CTGAGCCGCACGTTCCGCGTGGAGCTGGACGTGGACGGCGAGTTCACCGACGTCCCGCAG
CTCGTGGGCCGCGAACGCCCGGACCTGGTGCTGCTCAACGACGACGACCTCGCCTACGCC
AAGATCCGCCTGGACGAGTGCTCCCTGGCCACGGCCACCACCCACCTCGGGGACTTCGAG
GAGTCCCTGCCCCGCTCGCTCGTGTGGGCCGCGGCGTGGGACTCCGTGCACGACGGCGTG
AGCCCCGCGAGCGACTACGTGGACCTCGTGCTCTCCAACGTGGGCCACGAGACGGACTCC
ACGGCCGTGCAGGTGCAGCTGCGCCAGCTGGACGTGGCCCTGGACCGCTACCTCGCGCCC
GAGCATGCGGACGAGGTGCGCGCGCGGGCCGCGGCGCAGCTGTGGGACCTCACGGCCGCC
GCGGAGGCCGGCTCCGACCACCAGTGGCAGTTCTTCCGGGCGTTCCTGCGCCGGGCCTGC
ACGCAGGAGCAGTTCGACCGCGTGGCCGGCTTCGCCCGGGGCGAGGGCGTCCCGCAGGGC
GTGGAGCTGGACACCGACACCCGCTGGTCCGTGCTCACCGCACTCGTGGCCGCGGGCCGT
GCGGGCACCGAGGAGATCGAGGCGGCTCTGCGCGAAGACAACACCGAGACGGGTGCGATC
GCCGCGGCCACCGCCCGCGCCGCGGTGCCCACCCCCGAGGCCAAGGCGCAGACCTGGCAG
CTCGTGGTCGAGCAGGGCGCCCTGCCCAACTCCCAGCAGCAGGCCGCCATCGCGGGGTTC
TTCCGGGTCCACGACGACGCCCTGCTCGCCCCCTACGCCGCCCGCTACTTCGCGGAAGTC
ACGGGGGTGTGGCGGGAACGCACCCACGAGCTCGCCCAGCAGGTGGCCGTGGGGCTCTTC
CCGCGCCACGCCACGCAGCAGACCGTGGACGACGCCCAGCGCTTCCTGGACTCCCTCGAC
CCGGCCCTGAGCGGGCTGCGGCGCATCGTGCTGGAGCGCCAGGACGCCGCGCGCCGGGCC
GTGCGCGCCCAGCAGGTCGACGCCGCGGCCACCGGCACGACCGGCGGCTCCGGCCGATGA


>KRH_11040 aminopeptidase N
MPGTNLTRAEAAERAQTLAVESYRVALELTGDPETFRVHTTVDFTATPGSSSFIDAITAS
VESVTLNGASLDPAEVSDGERIQLPGLAQRNELVVESTMRYMNTGEGLHRFVDPADGQVY
LYSQFEVADTRRMFPVFEQPDLKATFQFSVTAPADWAVVSNQPSPEPVAVSDGVARWDFS
PTPVMSCYVTALIAGPYVSTHDSLVSSDGRTIELGLFARRSLFEYVDAEEMFEVTKQGFE
FFESQFGVPYPFEKYDQLFVPQFNAGAMENAGAVTFVESYIFRSKPAQARVERRAITVLH
ELAHMWFGDLVTMRWWNDLWLNESFAEYMSTLACAQNTRYTNAWTTFAAGEKSWGYEQDQ
LPTTHPIKAEIPDLEAVLVNFDGITYAKGASVLKQLVAWVGQDEFMAGLNRYFGKHAWSN
TELSDLMVELEAASGRDLTDWSARWLETAGVNTLVPRVEADDDGVITSFRIEQLGQEGHP
TLRPHRVAVGFYDHREDTGLLSRTFRVELDVDGEFTDVPQLVGRERPDLVLLNDDDLAYA
KIRLDECSLATATTHLGDFEESLPRSLVWAAAWDSVHDGVSPASDYVDLVLSNVGHETDS
TAVQVQLRQLDVALDRYLAPEHADEVRARAAAQLWDLTAAAEAGSDHQWQFFRAFLRRAC
TQEQFDRVAGFARGEGVPQGVELDTDTRWSVLTALVAAGRAGTEEIEAALREDNTETGAI
AAATARAAVPTPEAKAQTWQLVVEQGALPNSQQQAAIAGFFRVHDDALLAPYAARYFAEV
TGVWRERTHELAQQVAVGLFPRHATQQTVDDAQRFLDSLDPALSGLRRIVLERQDAARRA
VRAQQVDAAATGTTGGSGR

NBRC No.	clone name	start	stop	length(bp)
G09-001-052	MDFO1S8502K05	1,185,975	1,231,029	45,055
G09-002-031	MDFO1S8502D19	1,175,092	1,221,890	46,799

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.