CDS Information : KRH_13440

Display	1000bp 10000bp 100000bp Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	1,512,662 / 1,511,451 / -
Location	complement(1511451..1512662)
Type	CDS
Length	1,212 bp (403 aa)

Product	hypothetical protein
Gene name
Functional category	Unclassified - hypothetical protein
EC number
Note
KEGG pathway
Sequence feature
References

UniProt	B2GI99
INSD	BAG29691.1 (DDBJ GenBank EMBL)
UniParc	UPI00017343F4

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=1e-81 A0JX86_ARTS2 Aminodeoxychorismate lyase Alignment 2 E=3e-78 A1R707_ARTAT Putative Uncharacterized BCR YceG family protein Alignment 3 E=5e-50 Q8G5X1_BIFLO Putative uncharacterized protein Alignment 4 E=1e-47 A1SJC9_NOCSJ Aminodeoxychorismate lyase Alignment 5 E=1e-46 A1A1A0_BIFAA Putative uncharacterized protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR003770 Aminodeoxychorismate lyase (Family) PF02618   ADC_lyase
SignalP	No significant hit
TMHMM	Transmembrane 1
SOSUI	Transmembrane 1

size of protein	403 amino acids
molecular mass	44,692.34 Da
pI	5.21
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 7.9 (32aa) 6 (24aa) 6 (24aa) 3.2 (13aa) 3.7 (15aa) 1 (4aa) 5.2 (21aa) 1.7 (7aa) 8.2 (33aa) 7.4 (30aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 7.2 (29aa) 0.5 (2aa) 3.2 (13aa) 5.2 (21aa) 4 (16aa) 6.7 (27aa) 3.5 (14aa) 4.2 (17aa) 7.2 (29aa) 7.9 (32aa)

>KRH_13440 hypothetical protein
GTGAGCGAAGAGCCGCGACGCAATGGCACCGGTGACGGGGCACCCCAGCACCGGGCACCC
GGTGGAGGGCAGGGCTCCGAGCACGCCACGGACGAAGGTCCCCACTCGCGCCTCATGGGC
ACGTTCGAGCACCACGACGTGACCCCCGAGCAGCGCAAGCGCCGCCGCACCCGCTCCCGG
GCCTCCATGGCCACCGCCATTGCGCTGTTCGTGGCCGCCCTGCTGGTGGTCGTGGCCGTG
CTGGGCTCGGCCCTCGGCCTGTTCGAGCGCAAGGACTACCACGGCTCGGGGGACCAGGAC
GTGAACTTCTCCGTCTCGGACGGCAGCACCACGGGCCAGATCGCCCAGGACCTGCAGTCC
CAGGAGATCGTGGCGAACTCCTCCTACTTTGTCTCCCAGTTCCAGAAGCGCTACCCCCAG
GACTTCATCCAGCCCGGGGACTACCAGCTCAAGACGCACATGAGCTCCGAAGACGTCATC
AATCGGCTCATGGACAAGGGCGAGGCCTCGCACTACGCCGCCATCGCCAAGACCCAGCGT
CTTGACGACACCCTCACCACCCTGAGCCAGGCCACGGGCATCCAGAAGTCCGAGTTCGAG
ACGCTCGCCTCGGACAAGAAGAAGTTCGGCGTTCCGGAGAAGTTCCCGGACCTGGAGGGC
TGGCTGCACCCGGGGGAGTACCGCTTCCCCCTGGACGCCACCGCGGAGCAGGTGCTCCAG
GAGATGGTGGACCGCACCAAGGAGACCCTGAAGAAGAACGACGTCCCCGAGGACAAGTGG
TTCGAGGTGCTGACCATCGGCTCGATCGTGGAGTTCGAGGGCACCCCCAAGAACTACCCC
TCCGTGGCCGGGGCGATCGAGAACCGCATGAACCACCCGGACGGCGAGACCAGCGGCTTC
ATCCAGTCCGACGCCTCCGTGACGTACGGGCTGGGCAAGAAGACCGTGCACCTCACCGAC
GAGGAGAAGAAGGACAAGTCCAACCCGTACAACACGTACGCGAACCCGGGCCTGCCCGTG
GGTCCCATCGGCTCCCCGAGCGACGACGCCATCGCCGCCGCCGCGCACCCCGAGAAGAAC
GACTACTACTACTGGGTCACGGTCAACCTGGACACGGGTGAGACCAAGTTCGCCAAGACG
TACGAGGAGCACCAGAAGTACGTGGCCGAGTACCAGAAGTGGTGCTCCGACCACGAGGGA
AAGTGCTCCTGA


>KRH_13440 hypothetical protein
MSEEPRRNGTGDGAPQHRAPGGGQGSEHATDEGPHSRLMGTFEHHDVTPEQRKRRRTRSR
ASMATAIALFVAALLVVVAVLGSALGLFERKDYHGSGDQDVNFSVSDGSTTGQIAQDLQS
QEIVANSSYFVSQFQKRYPQDFIQPGDYQLKTHMSSEDVINRLMDKGEASHYAAIAKTQR
LDDTLTTLSQATGIQKSEFETLASDKKKFGVPEKFPDLEGWLHPGEYRFPLDATAEQVLQ
EMVDRTKETLKKNDVPEDKWFEVLTIGSIVEFEGTPKNYPSVAGAIENRMNHPDGETSGF
IQSDASVTYGLGKKTVHLTDEEKKDKSNPYNTYANPGLPVGPIGSPSDDAIAAAAHPEKN
DYYYWVTVNLDTGETKFAKTYEEHQKYVAEYQKWCSDHEGKCS

NBRC No.	clone name	start	stop	length(bp)
G09-001-065	MDFO1S8501M17	1,487,133	1,516,135	29,003
G09-002-038	MDFO1S8503M18	1,503,502	1,544,172	40,671

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.