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CDS Information : KRH_14790

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close this sectionGenomic map

Display Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon chromosome
Start / Stop / Direction 1,671,811 / 1,670,561 / -
Location complement(1670561..1671811)
Type CDS
Length 1,251 bp (416 aa)

close this sectionAnnotation

Product cell division protein FtsZ
Gene name ftsZ
Functional category Environmental Information and Cellular Processing
- Cellular Processes
EC number
Note
KEGG pathway KO:K03531
Sequence feature
References Family/Domain:IPR000158
Uniprot:P64170 Pubmed:11932443,12777499
Uniprot:P0A9A6 Pubmed:12807907,14553913

close this sectionRelated links to external database

UniProtB2GJP5
INSDBAG29826.1 (DDBJ GenBank EMBL)
UniParcUPI00017345FD

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=1e-171A1R5G1_ARTATCell division protein FtsZAlignment
2E=1e-168A0JV97_ARTS2Cell division protein FtsZAlignment
3E=1e-158A3TJS9_9MICOCell division protein FtsZAlignment
4E=1e-157A6WCX1_KINRACell division protein FtsZAlignment
5E=1e-154FTSZ_STRCOCell division protein ftsZAlignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR000158 Cell division protein FtsZ, N-terminal (Domain)
 [96-117]  PS01135
PS01135   FTSZ_2
 [59-77]  4.2e-74 PR00423 [97-117]  4.2e-74 PR00423 [125-146]  4.2e-74 PR00423 [188-210]  4.2e-74 PR00423 [211-232]  4.2e-74 PR00423 [255-273]  4.2e-74 PR00423
PR00423   CELLDVISFTSZ
 [1-345]  2.6e-164 TIGR00065
TIGR00065   ftsZ: cell division protein FtsZ
 [43-77]  PS01134
PS01134   FTSZ_1
IPR000158 Cell division protein FtsZ (Family)
 [43-77]  PS01134
PS01134   FTSZ_1
 [59-77]  4.2e-74 PR00423 [97-117]  4.2e-74 PR00423 [125-146]  4.2e-74 PR00423 [188-210]  4.2e-74 PR00423 [211-232]  4.2e-74 PR00423 [255-273]  4.2e-74 PR00423
PR00423   CELLDVISFTSZ
 [1-345]  2.6e-164 TIGR00065
TIGR00065   ftsZ: cell division protein FtsZ
 [96-117]  PS01135
PS01135   FTSZ_2
IPR003008 Tubulin/FtsZ, GTPase (Domain)
 [11-204]  1.3e-96 PF00091
PF00091   Tubulin
 [8-219]  1.7e-84 G3DSA:3.40.50.1440
G3DSA:3.40.50.1440   no description
 [10-207]  2.6e-69 SSF52490
SSF52490   Tubulin nucleotide-binding domain-like
IPR008280 Tubulin/FtsZ, C-terminal (Domain)
 [206-327]  4.1e-31 PF03953
PF03953   Tubulin_C
 [206-330]  2.9e-40 SSF55307
SSF55307   Tubulin C-terminal domain-like
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain (Domain)
 [224-330]  5.6e-32 G3DSA:3.30.1330.20
G3DSA:3.30.1330.20   no description
IPR019746 Tubulin/FtsZ, N-terminal (Family)
 [10-207]  2.6e-69 SSF52490
SSF52490   Tubulin nucleotide-binding domain-like
IPR020805 Cell division protein FtsZ, conserved site (Conserved_site)
 [96-117]  PS01135
PS01135   FTSZ_2
 [43-77]  PS01134
PS01134   FTSZ_1
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 416 amino acids
molecular mass 42,826.45 Da
pI 4.13
aa composition
AlaValLeuIlePheTrpProMetGlySer
12.7
(53aa)		7.7
(32aa)		8.2
(34aa)		6
(25aa)		3.4
(14aa)		0
(0aa)		3.8
(16aa)		1.7
(7aa)		12.5
(52aa)		7.9
(33aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.3
(18aa)		0
(0aa)		4.1
(17aa)		4.3
(18aa)		0.5
(2aa)		1.9
(8aa)		0.7
(3aa)		5.8
(24aa)		8.7
(36aa)		5.8
(24aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G09-002-042 MDFO1S8503E21 1,649,995 1,692,514 42,520

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.