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CDS Information : KRH_14800

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close this sectionGenomic map

Display Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon chromosome
Start / Stop / Direction 1,673,185 / 1,672,049 / -
Location complement(1672049..1673185)
Type CDS
Length 1,137 bp (378 aa)

close this sectionAnnotation

Product putative cell division protein FtsQ
Gene name ftsQ
Functional category Environmental Information and Cellular Processing
- Cellular Processes
EC number
Note
KEGG pathway KO:K03589
Sequence feature
References Family/Domain:IPR005548

close this sectionRelated links to external database

UniProtB2GJP6
INSDBAG29827.1 (DDBJ GenBank EMBL)
UniParcUPI00017345FE

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=2e-42A0JV96_ARTS2Polypeptide-transport-associated domain protein, FtsQ-typeAlignment
2E=1e-40A1R5G0_ARTATPutative Cell division protein FtsQAlignment
3E=2e-31A5CS49_CLAM3Putative cell division proteinAlignment
4E=3e-23Q6AE66_LEIXXCell division proteinAlignment
5E=3e-23A4AKL6_9ACTN50S ribosomal protein L6Alignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR005548 Cell division protein FtsQ (Family)
 [253-370]  0.0023 PF03799
PF03799   FtsQ
IPR013685 Polypeptide-transport-associated, FtsQ-type (Domain)
 [182-250]  4.6e-09 PF08478
PF08478   POTRA_1
SignalP No significant hit
TMHMM
 [162-184]  Transmembrane (i-o)
Transmembrane 1   
SOSUI
 [162-184]  Transmembrane
Transmembrane 1   

close this sectionCalculated information (Amino acid sequence)

size of protein 378 amino acids
molecular mass 39,099.66 Da
pI 6.33
aa composition
AlaValLeuIlePheTrpProMetGlySer
13
(49aa)
12.4
(47aa)
7.7
(29aa)
1.1
(4aa)
1.9
(7aa)
0.5
(2aa)
8.2
(31aa)
0.5
(2aa)
10.8
(41aa)
7.9
(30aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.5
(17aa)
0
(0aa)
0.8
(3aa)
3.4
(13aa)
0.5
(2aa)
2.9
(11aa)
2.1
(8aa)
8.7
(33aa)
8.7
(33aa)
4.2
(16aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G09-002-042 MDFO1S8503E21 1,649,995 1,692,514 42,520
G09-002-043 MDFO1S8502I17 1,671,320 1,711,203 39,884

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.