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CDS Information : KRH_18640

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close this sectionGenomic map

Display Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon chromosome
Start / Stop / Direction 2,135,457 / 2,133,688 / -
Location complement(2133688..2135457)
Type CDS
Length 1,770 bp (589 aa)

close this sectionAnnotation

Product trehalose synthase
Synonym: maltose alpha-D-glucosyltransferase
Gene name treS
Functional category Metabolism
- Carbohydrate Metabolism
EC number 5.4.99.16
Note
KEGG pathway map:00500 ec:5.4.99.16
ec:5.4.99.16
Sequence feature
References Uniprot:O07176 Pubmed:10658666

close this sectionRelated links to external database

UniProtB2GFS3
INSDBAG30211.1 (DDBJ GenBank EMBL)
UniParcUPI0001734369

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=0A0JSW6_ARTS2Trehalose synthaseAlignment
2E=0A1R391_ARTATTrehalose synthaseAlignment
3E=0A3TG94_9MICOTrehalose synthaseAlignment
4E=0A6W7J5_KINRATrehalose synthaseAlignment
5E=0A5CRQ7_CLAM3Putative trehalose synthaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR006047 Glycosyl hydrolase, family 13, catalytic region (Domain)
 [27-427]  5.3e-74 PF00128
PF00128   Alpha-amylase
IPR006048 Alpha-amylase, C-terminal all beta (Domain)
 [477-512]  0.00042 PF02806
PF02806   Alpha-amylase_C
IPR006589 Glycosyl hydrolase, family 13, subfamily, catalytic region (Domain)
 [27-427]  7.1e-107 SM00642
SM00642   no description
IPR012810 Trehalose synthase/alpha-amylase, N-terminal (Domain)
 [18-565]  TIGR02456
TIGR02456   treS_nterm: trehalose synthase
IPR013781 Glycoside hydrolase, catalytic core (Domain)
 [15-475]  1.4e-116 G3DSA:3.20.20.80
G3DSA:3.20.20.80   no description
IPR015902 Glycoside hydrolase, family 13 (Family)
 [15-562]  3.4e-149 PTHR10357
PTHR10357   AMYLASE
IPR017853 Glycoside hydrolase, catalytic core (Domain)
 [29-476]  7.9e-129 SSF51445
SSF51445   (Trans)glycosidases
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 589 amino acids
molecular mass 67,196.37 Da
pI 4.56
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.1
(42aa)
5.9
(35aa)
9.2
(54aa)
4.1
(24aa)
5.9
(35aa)
2.4
(14aa)
6.8
(40aa)
2.7
(16aa)
7
(41aa)
5.8
(34aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.1
(30aa)
1
(6aa)
3.2
(19aa)
2.9
(17aa)
3.9
(23aa)
1.5
(9aa)
3.4
(20aa)
7
(41aa)
8.3
(49aa)
6.8
(40aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G09-001-094 MDFO1S8501C08 2,112,012 2,150,410 38,399

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.