CDS Information : KRH_19080

Display	1000bp 10000bp 100000bp Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	2,193,272 / 2,192,169 / -
Location	complement(2192169..2193272)
Type	CDS
Length	1,104 bp (367 aa)

Product	phosphate ABC transporter phosphate-binding protein
Gene name	pstS
Functional category	Environmental Information and Cellular Processing - Membrane Transport
EC number
Note
KEGG pathway	KO:K02040
Sequence feature
References	Family/Domain:IPR005673 Uniprot:P15712 Pubmed:11373123 Uniprot:P0AG82 Pubmed:1700257,2215649

UniProt	B2GG54
INSD	BAG30255.1 (DDBJ GenBank EMBL)
UniParc	UPI0001734424

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=1e-125 A1R1A5_ARTAT Phosphate ABC transporter, phosphate-binding protein Alignment 2 E=1e-117 A0JRD3_ARTS2 Phosphate ABC transporter, periplasmic phosphate-binding protein precursor Alignment 3 E=2e-96 A4AIH9_9ACTN Phosphate porter Alignment 4 E=4e-91 A1SPM5_NOCSJ Phosphate ABC transporter, periplasmic phosphate-binding protein precursor Alignment 5 E=3e-88 A7A3X0_BIFAD Putative uncharacterized protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR005673 Periplasmic phosphate binding protein (Family) TIGR00975   3a0107s03: phosphate ABC transporter, phos IPR006059 Bacterial extracellular solute-binding protein, family 1 (Family) PF01547   SBP_bac_1
SignalP	Bacteria, Gram-positive
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	367 amino acids
molecular mass	37,776.71 Da
pI	4.74
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 15 (55aa) 7.4 (27aa) 5.4 (20aa) 3.3 (12aa) 1.9 (7aa) 1.1 (4aa) 4.4 (16aa) 1.1 (4aa) 10.1 (37aa) 9.8 (36aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.5 (24aa) 0.8 (3aa) 3.5 (13aa) 3.5 (13aa) 3 (11aa) 7.6 (28aa) 1.4 (5aa) 1.6 (6aa) 7.4 (27aa) 5.2 (19aa)

>KRH_19080 phosphate ABC transporter phosphate-binding protein
GTGAAGGTTTCGCACGTTGGCCGCTCGGCCGCAGTTCTGGCCATTGGTGCCCTCGCCCTG
ACCGCTTGCGGTTCCGACAACCCCACCGGCAGCAGCGGGGGCGGCGGCGGGGACAAGGGT
GTCTCCGGAACCCTGACCGGCATCGGCGCCTCCTCGCAGCAGGCCGCCATGACCGCGTGG
CAGAACGGCTTCCAGTCCTCCAACAACGGGGCCACGGTGCAGTACTCCCCGGACGGCTCC
GGCGCGGGGCGCAAGGCGTTCCTGGCCGGCGGCGCCAACTTCGCGGGCTCGGACGCGTAC
CTGTCCGAGAAGGAGCTGCCGGACGCCAAGAAGCAGTGCGGCGACGCCGGGGCCATGGAC
CTGCCGGTCTACGTGTCCCCGATCTCCGTGGCGTTCAACCTGCCCGGCATCGAGTCCCTC
AACCTCGACGCCCCCACCATCGCCAAGATCTTCAAGGGCGAGATCAAGAAGTGGAACGCC
GAGGAGATCAAGCAGCAGAACCCGGACGCCAAGCTGCCGGACACCGCCGTGACCGTGGTG
CACCGCAGCGACGACTCCGGCACCACCGAGAACTTCACCGACTACCTCAGCAAGGCCGCG
CCCAAGGACTGGACGGACGAGCCGGACCAGGCCTGGCCCTCCAAGTACGCCGCCGAGAAC
AACAAGGGCACCTCCGGTGTGGTCTCCACCACCTCCAGCACCGAGGGTGCCGTGACCTAC
GCCGACTCCTCGGCCGTGGGCGACCTCGGCACCGCGGCCATCAAGGTGGGCGAGAAGTAC
GTCAAGCACTCGCCCGAGGCCGCGGCCAAGGCCGTGGAGGTCTCCAAGCAGGTCGAGGGC
CGCGGCGAGCACGACCTCGCCATGAACATCCAGCGCGACACCAAGGAGGCCGACGCCTAC
CCGCTCGTGCTGATCTCCTACCACGTGGTCTGCGCCCAGTACGACTCCAAGGAGACCGCG
GACCTCGTGAAGGCCTTCGAGACCTACGTGGTCTCCGAGGACGGCCAGAAGACCGCCGCG
GACGCCTCCGGCTCCGCCCCCCTGTCCCCGGCGCTGCGGGACAAGGCCAAGGCGGCCGTG
GACACCATTTCCGCGAAGGGCTGA


>KRH_19080 phosphate ABC transporter phosphate-binding protein
MKVSHVGRSAAVLAIGALALTACGSDNPTGSSGGGGGDKGVSGTLTGIGASSQQAAMTAW
QNGFQSSNNGATVQYSPDGSGAGRKAFLAGGANFAGSDAYLSEKELPDAKKQCGDAGAMD
LPVYVSPISVAFNLPGIESLNLDAPTIAKIFKGEIKKWNAEEIKQQNPDAKLPDTAVTVV
HRSDDSGTTENFTDYLSKAAPKDWTDEPDQAWPSKYAAENNKGTSGVVSTTSSTEGAVTY
ADSSAVGDLGTAAIKVGEKYVKHSPEAAAKAVEVSKQVEGRGEHDLAMNIQRDTKEADAY
PLVLISYHVVCAQYDSKETADLVKAFETYVVSEDGQKTAADASGSAPLSPALRDKAKAAV
DTISAKG

NBRC No.	clone name	start	stop	length(bp)
G09-001-096	MDFO1S8501J21	2,158,842	2,202,884	44,043
G09-001-097	MDFO1S8503O13	2,190,745	2,228,344	37,600

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.