CDS Information : KRH_21530

Display	1000bp 10000bp 100000bp Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	2,480,003 / 2,481,400 / +
Location	2480003..2481400
Type	CDS
Length	1,398 bp (465 aa)

Product	putative two-component histidine kinase
Gene name
Functional category	Environmental Information and Cellular Processing - Signal Transduction
EC number	2.7.13.-
Note	KRH_21540 is a potential cognate response regulator.
KEGG pathway
Sequence feature
References	Family/Domain:IPR011712 Family/Domain:IPR003594

UniProt	B2GHY8
INSD	BAG30500.1 (DDBJ GenBank EMBL)
UniParc	UPI00017343A4

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=2e-58 A0R231_MYCS2 Two-component system sensor kinase Alignment 2 E=2e-58 A3Q3H1_MYCSJ Integral membrane sensor signal transduction histidine kinase Alignment 3 E=3e-58 A1UK16_MYCSK Integral membrane sensor signal transduction histidine kinase Alignment 4 E=3e-58 Q1B521_MYCSS Putative signal transduction histidine kinase Alignment 5 E=1e-56 A4T8N3_9MYCO Integral membrane sensor signal transduction histidine kinase Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR003594 ATP-binding region, ATPase-like (Domain) PF02518   HATPase_c SSF55874   ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR011712 Histidine kinase, dimerisation and phosphoacceptor region (Domain) PF07730   HisKA_3
SignalP	Bacteria, Gram-positive
TMHMM	Transmembrane 4
SOSUI	Transmembrane 4

size of protein	465 amino acids
molecular mass	48,280.07 Da
pI	8.48
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 16.3 (76aa) 9.9 (46aa) 11.8 (55aa) 2.4 (11aa) 2.2 (10aa) 1.5 (7aa) 5.6 (26aa) 1.3 (6aa) 10.3 (48aa) 7.5 (35aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.6 (26aa) 0.2 (1aa) 1.1 (5aa) 2.4 (11aa) 1.5 (7aa) 0.9 (4aa) 2.2 (10aa) 8.4 (39aa) 4.5 (21aa) 4.5 (21aa)

>KRH_21530 putative two-component histidine kinase
GTGGTGGACTCGGTGCTGAACGCGGCGCTGATCACCCTGGTGTTCGGGCTGCTCGTGGCG
GGCATCGCCACCCTGCCGTTCCTGGGCGCGGGCGTGCTCGTGCTCGCGGGCACGGTGTAC
GTGATGATGGCGGCGGTGTGGCTGGAGCGGCGTCGCTCGGCGTCCTCGTTCGGCCTGGAC
ATCCGCGATCCCCAGCGGCGGCGCAGCCCGCGCAGGGACTGGGTGCGCTGGCCCCACCAG
GTGTGGCTGGACCTCAGCGACGGCTCCCTGTGGCTCGGGCTGCTCCACCTGGTGCTCACG
TGCGCGCTGGGCTGGCTCGCGCTGCTGCCGTTCGTCACGGTGGGCGCGGGCACCGCGCTC
GCCCTCGCCCCGCTCTACGCTCCCGACGACTCCGTGGTGCGCCAGGCCCTGGCCGCCGTC
GGGGACCTGCCCGAGTGGGCCGCCGTGGTGCTCGCCGTGGCCGCGGTGGTGCTGAGCGTG
CTGCTCGGCCTGCTGGCCACGCTGGCCCACCGCGGGCTCTCCGCCGGGCTGCTGCGCCAG
AGCGAGTCCATGCGGCTGCGCCGTGAGGCGCTGGAGGCCCGCCGCCGCGCCGAGCACGAG
TCCGCCGCCAAGGAGTCAGCAGTCCGTGGCGCGGAGACCGAGCGCTCCCGCATCGAGCGG
GACCTGCACGACGGCGTCCAGCCGCAGCTGGTCTCGGTGGCCATGAACCTCTCGATGGCC
TCGTCCCGGATCGACACCGATCCCGCCGCCGCCAAGCAGCTCGTGGCGGAGGCCCACGGC
ACCACCAAGGCCGCGATCACGGAGCTGCGCCGCCTCGCCCGCGGCTTCCACCCCGCTGTG
CTCGAGGACCGCGGGCTCGACGCCGCCCTGTCCGCCGTGGCCGCGCAGGCCCCGTTCCCC
GTGGACGTCTCCGTGACGGTCCCCCGGCTGGAGCCGCGCACCGAGGCCGCCATCTACTTC
GCGGTCTCCGAGAGCCTCACCAACGCCGTCAAGTACTCCGGCACCCGCTCTGCGGACGTG
GCCGTGTCCCTGCAGAACGGCGCGGCCCCCGGCACGAGCGTGGTGGTGGCCGGTGTCCGC
GACTTCGGCCGCGGCGGCGCCCGGGTGGTCCCCGGCGGCGGCCTGTCCGGGATCCAGGAC
CGCATCCGCTCCGCGGGCGGCCGGTTCTTCGTGGACTCCCCGGCCGGCGGCCCCACGGAG
ATCATCGTGGAGCTGCCCCTCACCGGCCCCACCGCGCCCCGCACCGCGCGGAGCACAGCC
GGCACGGACCACGCCGCTCACCACGGGGGCGCGAGCGCACCGGGCACCTCCGGTGGGCCG
GGGCAGGGAACGGGCGGGGCGGCGTCGTCGTACCCCGCGGCCGGAAACGCGTACCCCACA
GCGGGAGAGGAGTACTGA


>KRH_21530 putative two-component histidine kinase
MVDSVLNAALITLVFGLLVAGIATLPFLGAGVLVLAGTVYVMMAAVWLERRRSASSFGLD
IRDPQRRRSPRRDWVRWPHQVWLDLSDGSLWLGLLHLVLTCALGWLALLPFVTVGAGTAL
ALAPLYAPDDSVVRQALAAVGDLPEWAAVVLAVAAVVLSVLLGLLATLAHRGLSAGLLRQ
SESMRLRREALEARRRAEHESAAKESAVRGAETERSRIERDLHDGVQPQLVSVAMNLSMA
SSRIDTDPAAAKQLVAEAHGTTKAAITELRRLARGFHPAVLEDRGLDAALSAVAAQAPFP
VDVSVTVPRLEPRTEAAIYFAVSESLTNAVKYSGTRSADVAVSLQNGAAPGTSVVVAGVR
DFGRGGARVVPGGGLSGIQDRIRSAGGRFFVDSPAGGPTEIIVELPLTGPTAPRTARSTA
GTDHAAHHGGASAPGTSGGPGQGTGGAASSYPAAGNAYPTAGEEY

NBRC No.	clone name	start	stop	length(bp)
G09-002-067	MDFO1S8503E11	2,467,549	2,509,938	42,390

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.