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CDS Information : KRH_22440

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close this sectionGenomic map

Display Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon chromosome
Start / Stop / Direction 2,577,183 / 2,575,450 / -
Location complement(2575450..2577183)
Type CDS
Length 1,734 bp (577 aa)

close this sectionAnnotation

Product putative acyltransferase
Gene name
Functional category Unclassified
- putative function (general)
EC number 2.3.1.-
Note
KEGG pathway
Sequence feature
References Family/Domain:IPR000542

close this sectionRelated links to external database

UniProtB2GIR4
INSDBAG30591.1 (DDBJ GenBank EMBL)
UniParcUPI0001734506

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=8e-50A4FEG0_SACENCarnitine O-acetyltransferaseAlignment
2E=2e-49A1GFG6_9ACTOCarnitine O-acetyltransferaseAlignment
3E=7e-48Q0RPS4_FRAAAPutative Carnitine O-acetyltransferaseAlignment
4E=5e-47A4X6L6_9ACTOCarnitine O-acetyltransferaseAlignment
5E=5e-47Q3W8A5_9ACTOCarnitine O-acetyltransferaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR000542 Acyltransferase ChoActase/COT/CPT (Family)
 [2-570]  8.9e-43 PF00755
PF00755   Carn_acyltransf
 [42-570]  5.3e-59 PTHR22589
PTHR22589   CARNITINE O-ACYLTRANSFERASE
IPR023213 Chloramphenicol acetyltransferase-like domain (Domain)
 [72-365]  5.7e-25 G3DSA:3.30.559.10
G3DSA:3.30.559.10   no description
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 577 amino acids
molecular mass 63,338.53 Da
pI 5.5
aa composition
AlaValLeuIlePheTrpProMetGlySer
14
(81aa)
8.7
(50aa)
10.4
(60aa)
1.9
(11aa)
3.3
(19aa)
1.4
(8aa)
6.1
(35aa)
1.2
(7aa)
7.5
(43aa)
3.8
(22aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.8
(39aa)
1
(6aa)
0.7
(4aa)
2.9
(17aa)
2.8
(16aa)
0.7
(4aa)
3.1
(18aa)
9.9
(57aa)
5.2
(30aa)
8.7
(50aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G09-002-070 MDFO1S8502M06 2,550,178 2,585,858 35,681

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.