CDS Information : KRH_23170

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Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	2,654,661 / 2,653,072 / -
Location	complement(2653072..2654661)
Type	CDS
Length	1,590 bp (529 aa)

Product	putative two-component histidine kinase
Gene name
Functional category	Environmental Information and Cellular Processing - Signal Transduction
EC number	2.7.13.-
Note
KEGG pathway
Sequence feature
References	Family/Domain:IPR005467

UniProt	B2GJB6
INSD	BAG30664.1 (DDBJ GenBank EMBL)
UniParc	UPI00017345EC

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=4e-53 A3TKW8_9MICO Sensor protein Alignment 2 E=7e-53 A1SHH7_NOCSJ Sensor protein Alignment 3 E=6e-49 A1SD51_NOCSJ ATP-binding region, ATPase domain protein domain protein precursor Alignment 4 E=1e-48 A0JR47_ARTS2 Sensor protein Alignment 5 E=2e-46 A6W8L7_KINRA Sensor protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR003594 ATP-binding region, ATPase-like (Domain) G3DSA:3.30.565.10   no description PF02518   HATPase_c SM00387   no description SSF55874   ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR003660 Histidine kinase, HAMP region (Domain) PF00672   HAMP PS50885   HAMP IPR003661 Histidine kinase A, N-terminal (Domain) PF00512   HisKA SM00388   no description IPR004358 Histidine kinase related protein, C-terminal (Domain) PR00344   BCTRLSENSOR IPR005467 Histidine kinase (Domain) PS50109   HIS_KIN IPR009082 Histidine kinase, homodimeric (Domain) SSF47384   Homodimeric domain of signal transducing histidine kinase
SignalP	Bacteria, Gram-positive
TMHMM	Transmembrane 2
SOSUI	Transmembrane 2

size of protein	529 amino acids
molecular mass	56,757.25 Da
pI	6.04
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 12.5 (66aa) 9.6 (51aa) 12.5 (66aa) 1.9 (10aa) 2.1 (11aa) 0.6 (3aa) 3.8 (20aa) 1.5 (8aa) 7.8 (41aa) 5.1 (27aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 10.2 (54aa) 0.8 (4aa) 2.5 (13aa) 4.3 (23aa) 0.8 (4aa) 0.8 (4aa) 1.9 (10aa) 9.6 (51aa) 5.5 (29aa) 6.4 (34aa)

>KRH_23170 putative two-component histidine kinase
ATGAGCGCCCGCTTCCCGGCAGTGACCCGCGTGCGGGACGGTGTCCGCCACCGCGGGGTG
CGCGCCATCCTCCTGCAGGTGCTCGCCCTGTTGTGCCTCGCACTGCTCTTCACCGGCGCC
ACCGCGCTGTGGGGCCTGCACACGGTGCAGCTGAACGTGGCCACCACGCGCACCACCATC
ACACCCCTGATGGATGCCACGCACCAGGTGGAGGCCACGCTGCTGCGTGCCCAGACGGCC
GCGCGCGGCTACGCGGTCAGCGGAGACCGGACCTTTGCGCGGGAGTACGCGGAGGCCACG
GCGGACCTCGCTGCGGCCCAGGACGTCCTGGGTGAGGTGGCGGCCGGGCGGCTGCCGCAG
CTGCGGTCCTTGAACGAGTCCGTGGACACGTGGCTCGGCCTCACCCGGGAACCAGGGAGG
GACACCCCGCGGAGATCTCTGGACCTCCCCCTCACGACATCCGCCATGGACCGGGCCCTC
GGCACACTGGAGGACGTCCGGGCGGACGCCTCCCGCCTGCGGGAGCAGCGCAGAGCGGAT
CTGAACCGGTCCATGACCCTGGCCGCGGCCGCCGTGGTGACTGCCGCGATGCTGTCGATC
GCGGTGGCGTTCCTCGCCCTGGGCCGCGCGGACCGCGCCCTCGGGGCGCCGCTGCTCGCG
CTGCAGCGCACGGTGGCGAGGCAGCGTGCGGGCGATCATGACGCCGTCGCGGAAACCTCC
CACGGCGCTCTTGAAGTGGTGGGCCTCGCCGCGTCCTTCAACGCCTTCACCCGCGAGGCC
CGGGACGTGGTGGAGCAGCGGGAGCGCACCCTGGAGCAGCTCACGGAGCTCAACCGCCAG
AAATCCGTGTTCGTCTCCACCACCAACCACGAGCTGCGAACCCCGCTCACGTCCATCAGC
GGCTATGTGGAGATGCTCCAGGACGGGGACTTCGGCAGTGTCGGCCCGGAACAGGCCCGC
GTGCTGGAAGTGGTGCGGCGCAACACGGAACGGCTGCGGCTGCTGATCGAGGACCTGCTG
CTGATCAACAAGCTGGACCAGGACCAGGAGAACCGCTCGGCGCGCCACCGTGTGCTGGAC
CTCGCAGAGTGCGTGTCCGGGGTGGTCACCAATCTCGTTCCCCAGGCCGCGGCGGGCGAG
GTGACCGTCCACGCGGACACGGACGGTTCATGGCCCGTGTCCGGGGACCGGGACCGTCTG
GAGCGGGCCGTCACCAACGTGGTGGGCAACGCCATCAAGTTCACCCCGCCCCACGGCGCG
GTCACGCTGACGCTGGAACGCACCTCCGGTGGCACGGGAGTCCGCCTGACGTGCACGGAC
ACCGGGATGGGCATTCCCGAGAAAGAGGTGGGGTCCCTCTTCACGAGCTTCACCCGGGCC
TCCAACGCCACGGCCCAGCAGGTGCCCGGAACGGGACTGGGGCTCGTAATCATGCGCACC
ATCGTGGAGCAGCACGGGGGGTCCGTGGCCCTGGAGTCGGTGGAGGGGGAAGGCACCACC
GTCACGCTGGATCTCCCCCTGACGACCCAGCAGGGCGAACCGGTGCAGCGGGCCGTGGAT
GCCGGCCCGCCGTGCTATTCTCCTGAATGA


>KRH_23170 putative two-component histidine kinase
MSARFPAVTRVRDGVRHRGVRAILLQVLALLCLALLFTGATALWGLHTVQLNVATTRTTI
TPLMDATHQVEATLLRAQTAARGYAVSGDRTFAREYAEATADLAAAQDVLGEVAAGRLPQ
LRSLNESVDTWLGLTREPGRDTPRRSLDLPLTTSAMDRALGTLEDVRADASRLREQRRAD
LNRSMTLAAAAVVTAAMLSIAVAFLALGRADRALGAPLLALQRTVARQRAGDHDAVAETS
HGALEVVGLAASFNAFTREARDVVEQRERTLEQLTELNRQKSVFVSTTNHELRTPLTSIS
GYVEMLQDGDFGSVGPEQARVLEVVRRNTERLRLLIEDLLLINKLDQDQENRSARHRVLD
LAECVSGVVTNLVPQAAAGEVTVHADTDGSWPVSGDRDRLERAVTNVVGNAIKFTPPHGA
VTLTLERTSGGTGVRLTCTDTGMGIPEKEVGSLFTSFTRASNATAQQVPGTGLGLVIMRT
IVEQHGGSVALESVEGEGTTVTLDLPLTTQQGEPVQRAVDAGPPCYSPE

NBRC No.	clone name	start	stop	length(bp)
G09-002-073	MDFO1S8501E02	2,630,405	2,670,131	39,727

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.