CDS Information : KRH_23540

Display	1000bp 10000bp 100000bp Clone

Kocuria rhizophila DC2201 (= NBRC 103217) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kocuria rhizophila DC2201 (= NBRC 103217)
Replicon	chromosome
Start / Stop / Direction	2,696,076 / 2,695,093 / -
Location	complement(2695093..2696076)
Type	CDS
Length	984 bp (327 aa)

Product	OxaA family protein
Gene name
Functional category	Unclassified - uncharacterized protein
EC number
Note
KEGG pathway
Sequence feature
References	Uniprot:Q01625 Pubmed:1487728,11889108

UniProt	B2GJF3
INSD	BAG30701.1 (DDBJ GenBank EMBL)
UniParc	UPI000173467D

BLASTP Database:UniProtKB:12.5 show BLAST table	1 E=1e-100 A1RCB0_ARTAT Putative 60Kd inner membrane family protein Alignment 2 E=6e-98 A0K2M4_ARTS2 60 kDa inner membrane insertion protein Alignment 3 E=3e-83 A5CVC3_CLAM3 Conserved membrane protein Alignment 4 E=5e-78 A3TN60_9MICO Putative inner membrane protein translocase component YidC Alignment 5 E=9e-78 A4AEV8_9ACTN Putative inner membrane protein translocase component YidC Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR001708 60 kDa inner membrane insertion protein (Family) PTHR12428   OXA1 PF02096   60KD_IMP
SignalP	No significant hit
TMHMM	Transmembrane 5
SOSUI	Transmembrane 5

size of protein	327 amino acids
molecular mass	37,028.47 Da
pI	10.45
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 8.6 (28aa) 6.1 (20aa) 11 (36aa) 5.2 (17aa) 5.5 (18aa) 2.1 (7aa) 5.5 (18aa) 5.5 (18aa) 5.5 (18aa) 5.5 (18aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.2 (17aa) 0.6 (2aa) 4.6 (15aa) 8.3 (27aa) 1.5 (5aa) 6.4 (21aa) 1.8 (6aa) 4.3 (14aa) 1.5 (5aa) 5.2 (17aa)

>KRH_23540 OxaA family protein
ATGAACTTCTTCGACATGATTCTGCTGCCCTTCAAATGGATCGTCTCCGCGGTCCTGTGG
GCGTTCCACGAACTGTTCACCCTGATCGGGCTGGACCCCACCTCCGGTTTCACCTGGGTG
CTGTGCATCGTGGGCCTGACCCTGGTGATGCGCACGCTGACCATCCCGCTGTTCCTCAAG
CAGATCAAGTCCATGCGGGGGATGCAGGAGCTGCAGCCGGAGCTCGCCAAGCTGCAGGCC
AAGTACAAGGGCAAGAAGGACCAGCTCTCCCGCCAGGCCATGGCCGAGGAGCAGATGGCG
CTGTACAAGGAGCACGGGTCCAACCCGTTCGCGGCGTGCCTGCCCATCATCGTGCAGATG
CCCATCTTCTTCGCGCTGTTCCAGGTGCTGCGCTCGGTGCCGCAGGCGGCGGCCAACAAC
GAGGCCATCCACCTGCTCACGCCGCAGATGGTTCACGAGTTCAACGAGTCCACCATCTTC
GGTGCTCCCCTGTTCTCCACGCTGATGCAGCCGGGCACGGGCAACCATGCGGCCACCGTG
GTCCTCGCGCTCGTGATGATCGTGGCCATGAGCGCCACGCAGTTCATCACCCAGAAGCAG
CTGACCTCCCGCAACATGAGCGACTCCGCCAAGGAGTCGCCCATGTACCGCCAGCAGCAG
ATGATGCTCTACCTGTTCCCGCTGATCTTCGCGATCGGCGGCATCAACTTCCCGCTGGGC
GTGCTCGTGTACTGGACCGTGTCCAACCTCTGGTCCATGGGCCAGCAGTGGTGGGTCATC
CGCAACAACCCCACCAAGGGCTCGCAGGCCGAGCGGGAGCTCAACGAGCGTCGTGCGGCC
AAGGGTCTGCCTCCCGTGGGCATGTCCAAGAAGGAGCACGAGGACAAGCTCGAGGAGCAG
CGGGTGCGGGCGGCCGCGGGACAGCGCAACCAGCCCGTGTCCAAGAAGCGCCAGAAGCAG
CAGACCAAGAAGAACAACGGCTGA


>KRH_23540 OxaA family protein
MNFFDMILLPFKWIVSAVLWAFHELFTLIGLDPTSGFTWVLCIVGLTLVMRTLTIPLFLK
QIKSMRGMQELQPELAKLQAKYKGKKDQLSRQAMAEEQMALYKEHGSNPFAACLPIIVQM
PIFFALFQVLRSVPQAAANNEAIHLLTPQMVHEFNESTIFGAPLFSTLMQPGTGNHAATV
VLALVMIVAMSATQFITQKQLTSRNMSDSAKESPMYRQQQMMLYLFPLIFAIGGINFPLG
VLVYWTVSNLWSMGQQWWVIRNNPTKGSQAERELNERRAAKGLPPVGMSKKEHEDKLEEQ
RVRAAAGQRNQPVSKKRQKQQTKKNNG

NBRC No.	clone name	start	stop	length(bp)
G09-002-075	MDFO1S8502P22	2,669,973	12,875	40,443

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.