CDS Information : KSE_00120t

Display	1000bp 10000bp 100000bp Clone

Kitasatospora setae NBRC 14216T chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kitasatospora setae NBRC 14216T
Replicon	chromosome
Start / Stop / Direction	19,212 / 21,722 / +
Location	19212..21722
Type	CDS
Length	2,511 bp (836 aa)

Product	putative transposase
Gene name
Functional category	Other functions - transposon
EC number
Note
KEGG pathway
Sequence feature
References	Family/Domain:IPR001584

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=1e-138 B5HSB8_9ACTO Integrase Alignment 2 E=1e-100 D1XBM1_9ACTO Putative uncharacterized protein Alignment 3 E=2e-87 A4T3C1_MYCGI Integrase, catalytic region Alignment 4 E=6e-87 D1X7B9_9ACTO Putative uncharacterized protein Alignment 5 E=2e-86 D3DBL5_9ACTO Putative uncharacterized protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:26.0	IPR001584 Integrase, catalytic region (Domain) PF00665   rve IPR012337 Polynucleotidyl transferase, Ribonuclease H fold (Domain) SSF53098   Ribonuclease H-like
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	836 amino acids
molecular mass	90,874.38 Da
pI	6.6
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 12.7 (106aa) 6.6 (55aa) 9.6 (80aa) 2.6 (22aa) 1.7 (14aa) 2 (17aa) 8.6 (72aa) 1.2 (10aa) 9 (75aa) 5.6 (47aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.3 (36aa) 1 (8aa) 1.7 (14aa) 4.2 (35aa) 2.5 (21aa) 2.5 (21aa) 1.3 (11aa) 9.9 (83aa) 6.7 (56aa) 6.3 (53aa)

>KSE_00120t putative transposase
GTGAGGGCCCAGAGGTCCGGCTGCACCTGCCGTACCGGCAGCGCGCCGGGCACGGACGAC
GATGACGGGCGGTGCGCCGGCCTGGAGCCGGGCGACACGGTCCGCTGGCACGGCGCCTCG
TACCTGGTGGCCGCCCTGCAGGGCGGCCGGGTCCACCTGAGCGCCGCCGACGAGGACGGC
GAGGACGCGGTCGCGCTGCTGTCGGCCGTCGTAGGTGCCCCGGACTTCGCGGTCCTGGAC
GACGCCGGCACGGAGCGGCCCGGAGCCCGGATCCCCGACGTCAGCATCCTGTCCCTGCTC
ACCCCGGCTGAACTGGTTGACGTCCGCGCGTGGGAGCGGCACCTGCGCGAGGCAGAGGAA
GGCCTGCCGCCGGGTTGCGCACCCGACGCGCGGCCCCGGCCCGAGTACGACCCGGCCACC
GTCTCCCGCAGCCAGCGGTTGGCCAGCAAGGAGCGCGAACTCAAGGCGCTGGGCTGGCGC
AAGGTGTCGGTGGCGACCTTGGACCGGCGCTTGAAGGAGTACTCGGCCCAGGGCGTGGCG
GCCCTGGTGAAGGTCGTCGCCGGAAAGCTCTACGGGAACACCGACGAGCGGATCGTCGCC
CTGCTGCTGCAGGAGCTCAAAGACGGAGTCGAGGAGTCCTCCGGCTGGGGCACCCGCCTG
CACGAGCGGCTGCAGGCCGGCCTGCGCGCGGCCTACCCCGAGGAGAACCTGAGGATCTCC
CGCACCGGGTTCTACCGGCTGCTGAACAGCCTCGGCACCCGCACGGGCTCCCTGCGCGGG
CCTGTACGCCGCCGCAGGGAGGCGGCGGGCTCCCCCGAGCCGCCGTGGACGCCCACACGG
GCACGGATGCTCGGCGAGATGGTGCAGATCGACTCGACCGGCCTGGATGTGCTTGCGATC
GGCGACGACGGCTACCCGGTCCAAGTCGAGCTGACCGCGGCTGTGGACGTGGCCAGCCGC
AGCATCATCGGGGCACTGATCGTGCCCCGCGCTCCTGGCCGTGGGTACAAGGGCAAGCGG
CTGGGCGGACGAGCGACCACCTCGTTCGACGCCACCCTCATGCTCGCGCAGGCACTCGCC
CCCATGCCGGCCCGGCCCGGATGGTCGCCGCTCAGCAGGGCTGAGCTGTCGGATCTGCCC
TACGCGGATCAGGTCGCCTGCGATCCGCGGATGGCCGGTGCCGCGGCGCGGCCGGTGATC
CGCCCGAAGATGGTCGTCGTCGACCAGGGGAAGATCTACCAGGGCGAGCACTTCGAGGAC
GTGTGCACCTCGCTGGGGATCTCGATCAGGTCGGCGCGGGACAACACCGGCCCCGACAAG
GCGATCGTGGAGGCGACGTTCTCCGCCTTGAAGAAGCTGTTCAGCCAGTACGTGGCCGCC
TACACGGCACGGGACCTGGCCCGGCGCGGCAAGTACGTGGCCGAGGGGCCGATGTGGCGG
CTCAACGAGCTGCAGGACCTGCTGAACGAATGGATAGCGCTGCACTGGCAGCAGCACCGC
CACGAGGGGTTGCGCAGCCCGAACCTGCCCGGTGTGGTACTCACCCCCAACCAGATGTAC
GCGGCTCTCGTGGCATGCGAGGGGTACGCGCCGCTGCCCTTGTCGCCGTCGCAGTCGCGC
AAGCTGCTGCTCTGCGAGTGGCGGCAGGTCGGCGACAAGGGCGTGCGGGTCGGCAACCGC
ACGTACAACAGCGCCGCGCTCCAGGCATACAACAAGCAGCCCTCCGGGGTGCGGGGGCAG
GGCAAGAGGTGGCCGATCCGCTTCGACCCGTACGCGCCGCACTATGTGTGGCTGTTCGAC
CAGCGCCAGGAGCAGCTCGGCAAGGACCCGTGGGTGGAGGCCGAGTTCATCCACCAGGAC
CTGATCGACGGCGAGTGGTCCCAGTACCTGTGGCAGACCGCGGAGCAGGCCTTCCTCAAT
GCGGGCGGCCCGGAGGAGCACGAGCAGCGGGAGCGCGACATCGCCTTGGCCGTGTCGGAG
TTGCGGGAGCGGGCGCGGCGCGGGCCGCTCGACGAGGCACCCGCCGCACGGGCCTGGCGG
CGGGCGGGCGCAGCTCGGCGGCTGTGGCGCCGGCCGGGCCGGCCGTTCACCGGGCCTCAG
CCGGCGGTGCGCCCGCCGGATCCGGACAGGTACGCCAGCATCAGTGTCCCCGACCCGGCC
ACGATCGTGCCGGCCCGCTCGTTGGAGAATCCCGCGCAGTTCCTCTTCCCTGATCAGGAC
GCCGGGCCGCGGCTGTCCGGCGACGCGGGCGTGCTGGTGACTGCGGGCGAGCCGGTCGCT
GTTCCCGACACGGACGAGCGTCCGCCGCAGAACGCAGAACCGCCGGCGGATCCCGGAGTG
GACATGACGACTGGGACTGGGAAGGAGCCGCGGCTGGTGGCACAGCGGCGCGGTTCCACG
GGTGGCATCGCCGATCTGTTCCTCAGCGGCCTGCCAGCCCCGGCCGATGCCTCCGATCCT
GCTCCCCCGCCCCGGGCAGCGGCCGGCTCCACCGACGAGGAGGATTCGTGA


>KSE_00120t putative transposase
MRAQRSGCTCRTGSAPGTDDDDGRCAGLEPGDTVRWHGASYLVAALQGGRVHLSAADEDG
EDAVALLSAVVGAPDFAVLDDAGTERPGARIPDVSILSLLTPAELVDVRAWERHLREAEE
GLPPGCAPDARPRPEYDPATVSRSQRLASKERELKALGWRKVSVATLDRRLKEYSAQGVA
ALVKVVAGKLYGNTDERIVALLLQELKDGVEESSGWGTRLHERLQAGLRAAYPEENLRIS
RTGFYRLLNSLGTRTGSLRGPVRRRREAAGSPEPPWTPTRARMLGEMVQIDSTGLDVLAI
GDDGYPVQVELTAAVDVASRSIIGALIVPRAPGRGYKGKRLGGRATTSFDATLMLAQALA
PMPARPGWSPLSRAELSDLPYADQVACDPRMAGAAARPVIRPKMVVVDQGKIYQGEHFED
VCTSLGISIRSARDNTGPDKAIVEATFSALKKLFSQYVAAYTARDLARRGKYVAEGPMWR
LNELQDLLNEWIALHWQQHRHEGLRSPNLPGVVLTPNQMYAALVACEGYAPLPLSPSQSR
KLLLCEWRQVGDKGVRVGNRTYNSAALQAYNKQPSGVRGQGKRWPIRFDPYAPHYVWLFD
QRQEQLGKDPWVEAEFIHQDLIDGEWSQYLWQTAEQAFLNAGGPEEHEQRERDIALAVSE
LRERARRGPLDEAPAARAWRRAGAARRLWRRPGRPFTGPQPAVRPPDPDRYASISVPDPA
TIVPARSLENPAQFLFPDQDAGPRLSGDAGVLVTAGEPVAVPDTDERPPQNAEPPADPGV
DMTTGTGKEPRLVAQRRGSTGGIADLFLSGLPAPADASDPAPPPRAAAGSTDEEDS

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.