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CDS Information : KSE_00890t

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close this sectionGenomic map

Display Clone

Kitasatospora setae NBRC 14216T chromosome

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Genome
Clone

close this sectionLocation

Organism Kitasatospora setae NBRC 14216T
Replicon chromosome
Start / Stop / Direction 103,745 / 101,958 / -
Location complement(101958..103745)
Type CDS
Length 1,788 bp (595 aa)

close this sectionAnnotation

Product putative trehalose synthase
Synonym: maltose alpha-D-glucosyltransferase
Gene name treS1
Functional category
- metabolism of carbohydrates and related molecules
- - specific pathways
EC number 5.4.99.-
Note
KEGG pathway map:00500 KO:K05343
Sequence feature
References Uniprot:P72235 Pubmed:8645698,8829531

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0C9Z6V9_STRSWPutative alpha amylaseAlignment
2E=0C9YX35_STRSWPutative alpha amylaseAlignment
3E=0B5GGV3_9ACTOTrehalose synthaseAlignment
4E=0D1XDP5_9ACTOTrehalose synthaseAlignment
5E=0C9NC92_9ACTOTrehalose synthaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR006047 Glycosyl hydrolase, family 13, catalytic region (Domain)
 [68-424]  8.2e-71 PF00128
PF00128   Alpha-amylase
IPR006589 Glycosyl hydrolase, family 13, subfamily, catalytic region (Domain)
 [53-455]  8.8e-120 SM00642
SM00642   no description
IPR012810 Trehalose synthase/alpha-amylase, N-terminal (Domain)
 [44-589]  TIGR02456
TIGR02456   treS_nterm: trehalose synthase
IPR013781 Glycoside hydrolase, catalytic core (Domain)
 [41-503]  6.9e-121 G3DSA:3.20.20.80
G3DSA:3.20.20.80   no description
IPR017853 Glycoside hydrolase, catalytic core (Domain)
 [55-504]  9.9e-136 SSF51445
SSF51445   (Trans)glycosidases
SignalP
 [1-30]  0.626 Signal
Bacteria, Gram-positive   
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 595 amino acids
molecular mass 67,576.12 Da
pI 5.5
aa composition
AlaValLeuIlePheTrpProMetGlySer
8.7
(52aa)
6.6
(39aa)
9.6
(57aa)
2.7
(16aa)
4.2
(25aa)
2.2
(13aa)
8.6
(51aa)
2.4
(14aa)
7.1
(42aa)
4.4
(26aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.7
(28aa)
1.2
(7aa)
3
(18aa)
3.2
(19aa)
4.2
(25aa)
1
(6aa)
2.7
(16aa)
9.9
(59aa)
8.4
(50aa)
5.4
(32aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G20-001-356 KS1E11L00034B08 8,722,426 8,761,631 39,206
G20-001-356 KS1E11L00034B08 73,908 110,817 36,910

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.