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CDS Information : KSE_10220

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close this sectionGenomic map

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Kitasatospora setae NBRC 14216T chromosome

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Overview 
Genome

close this sectionLocation

Organism Kitasatospora setae NBRC 14216T
Replicon chromosome
Start / Stop / Direction 1,131,650 / 1,133,461 / +
Location 1131650..1133461
Type CDS
Length 1,812 bp (603 aa)

close this sectionAnnotation

Product putative sialidase
Synonym: neuraminidase
Gene name
Functional category
- metabolism of carbohydrates and related molecules
- - specific pathways
EC number 3.2.1.18
Note
KEGG pathway map:00511 KO:K01186
map:01032 KO:K01186
Sequence feature
References Uniprot:Q02834 Pubmed:1400240

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-148D1SDB6_9ACTOExo-alpha-sialidaseAlignment
2E=3e-47D1XNX9_9ACTONeuraminidase (Sialidase)-like proteinAlignment
3E=2e-46B5HH14_STRPRSialidaseAlignment
4E=5e-45D1X0Q9_9ACTOGlycosyl hydrolase BNR repeat-containing proteinAlignment
5E=8e-45B1W5V1_STRGGPutative neuramidaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR002860 Glycoside hydrolase, BNR repeat (Repeat)
 [297-306]  1.5 PF02012 [371-380]  0.57 PF02012 [430-439]  0.22 PF02012 [546-554]  3.9 PF02012
PF02012   BNR
IPR011040 Neuraminidase (Domain)
 [237-601]  5.9e-53 SSF50939
SSF50939   Sialidases (neuraminidases)
 [237-597]  2.8e-68 G3DSA:2.120.10.10
G3DSA:2.120.10.10   no description
SignalP
 [1-31]  1 Signal
Bacteria, Gram-positive   
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 603 amino acids
molecular mass 61,352.39 Da
pI 5.17
aa composition
AlaValLeuIlePheTrpProMetGlySer
14.1
(85aa)
7.1
(43aa)
6.5
(39aa)
2.2
(13aa)
2.3
(14aa)
2.2
(13aa)
5.1
(31aa)
1.2
(7aa)
11.9
(72aa)
9.5
(57aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
13.1
(79aa)
1
(6aa)
4.3
(26aa)
2.5
(15aa)
3.2
(19aa)
1.2
(7aa)
1.5
(9aa)
4.1
(25aa)
6.1
(37aa)
1
(6aa)

open this sectionSequence