CDS Information : KSE_23240

Display	1000bp 10000bp 100000bp Clone

Kitasatospora setae NBRC 14216T chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kitasatospora setae NBRC 14216T
Replicon	chromosome
Start / Stop / Direction	2,578,541 / 2,577,501 / -
Location	complement(2577501..2578541)
Type	CDS
Length	1,041 bp (346 aa)

Product	putative alcohol dehydrogenase
Gene name
Functional category	- metabolism of carbohydrates and related molecules - - main glycolytic pathways
EC number	1.1.1.1
Note	Similar to Phenylacetaldehyde reductase PAR in Rhodococcus sp. ST-10 (Q65YQ4).
KEGG pathway	map:00010 KO:K00001 map:00071 KO:K00001 map:00350 KO:K00001
Sequence feature	38 (a.a.) METAL 62 (a.a.) METAL 92 (a.a.) METAL 95 (a.a.) METAL 98 (a.a.) METAL 106 (a.a.) METAL
References	Uniprot:Q65YQ4 Pubmed:10664854,11985623 Uniprot:Q6YBW1 Pubmed:12719937

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=1e-162 B1VLU5_STRGG Putative alcohol dehydrogenase Alignment 2 E=1e-162 D1WSY5_9ACTO Alcohol dehydrogenase GroES domain protein Alignment 3 E=1e-160 Q9S5E6_STRCO Oxidoreductase Orf1, orf2, orf3, orf4, orf5 genes, Alignment 4 E=1e-159 A3KJ65_STRAM Putative oxidoreductase Alignment 5 E=1e-157 C9NAI6_9ACTO Alcohol dehydrogenase GroES domain protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:26.0	IPR002328 Alcohol dehydrogenase, zinc-containing, conserved site (Conserved_site) PS00059   ADH_ZINC IPR002328 Alcohol dehydrogenase, zinc-containing (Domain) PS00059   ADH_ZINC IPR002328 Alcohol dehydrogenase, zinc-containing (Family) PS00059   ADH_ZINC IPR011032 GroES-like (Domain) SSF50129   GroES-like IPR013149 Alcohol dehydrogenase, zinc-binding (Domain) PF00107   ADH_zinc_N IPR013154 Alcohol dehydrogenase GroES-like (Domain) PF08240   ADH_N IPR016040 NAD(P)-binding domain (Domain) SSF51735   NAD(P)-binding Rossmann-fold domains IPR020843 Polyketide synthase, enoylreductase (Domain) SM00829   no description
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	346 amino acids
molecular mass	35,191.47 Da
pI	4.89
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 14.2 (49aa) 11.8 (41aa) 10.7 (37aa) 3.5 (12aa) 1.2 (4aa) 0.9 (3aa) 7.5 (26aa) 1.7 (6aa) 13.6 (47aa) 2.9 (10aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.4 (22aa) 1.4 (5aa) 0.9 (3aa) 1.7 (6aa) 2.6 (9aa) 2.3 (8aa) 2.9 (10aa) 3.8 (13aa) 4 (14aa) 6.1 (21aa)

>KSE_23240 putative alcohol dehydrogenase
ATGAAGGCAGTCCAGTACCGCACCGTCGGCGGCCACCCCGAGGTGGTCACCGTCCCCGAT
CCCGAACCCGGCCCCGGGCAGGTCCTGCTGAAGGTCACCGCCGCGGGCGTCTGCCACTCC
GACATCGCCGTGATGAGCTGGCCGGCCGAGCAGTTGCCGTTCCCGCTCCCGCTCACCCTC
GGGCACGAGGGCGTCGGCACCGTCGCCTCGCTCGGCGCGGGCGTCACCGGCCTCACCGAG
GGCGAGTCGGTCGCCGTGTACGGCCCGTGGGGCTGCGGCGCCTGCGCCAAGTGCGCCGAG
GGCAAGGAGAACTACTGCCTGCGCGCCGCCGAACTCGGCATCATGCCGCCCGGGCTGGGC
GCGCCCGGAGCGATGGCCGAGTACATGGTCGTCGACGACCCGCGGCACCTCGTCCCGCTC
GGCGACCTCGACCCGGTGCGCACCGTCCCGCTCACCGACGCCGGGCTGACCCCGTACCAC
GCGATCAAGCGCTCGCTGCCCAAGCTCGTGCCCGGCTCCACCGCGGTCGTCATCGGCACC
GGCGGCCTCGGACACGTCGCGATCCAGCTGCTGCGCGCGATGACCGCGGCCCGGGTGATC
GCCCTCGACGTCACCGAGGAGAAGCTCGCGCTGGCCCGCACCGTCGGCGCCCACGAGGCG
GTCCTCTCGGACGGCGCGGCGGCTGGCCACGTCCGCGAACTCACCGCCGGACTCGGCGCG
CAGGCCGTCTTCGACTTCGTCGGCGCCCCGCCCACCACCGCCCTGGCCGGACAGCTCGCC
GCCGTCGAGGGCGACGTCACCATCGTCGGCATCGGCGGCGGCACCCTGGCGGTCGGCTTC
GGCGCCCTGCCGTACGAGGTCTCCGTCACCTCCCCGTACTGGGGCAGTCGCGCCGAGCTG
ATCGAGGTCCTCGACCTGGCCCGGGCCGGCGCGGTCGACGTGCACGTCGAGACGTACGGC
ATCGACGAGGCGCCGCTGGCCTACGAGCGGCTGCACGCCGGGAAGATCAACGGGCGGGCG
GTGATCCTGCCGAACGGCTGA


>KSE_23240 putative alcohol dehydrogenase
MKAVQYRTVGGHPEVVTVPDPEPGPGQVLLKVTAAGVCHSDIAVMSWPAEQLPFPLPLTL
GHEGVGTVASLGAGVTGLTEGESVAVYGPWGCGACAKCAEGKENYCLRAAELGIMPPGLG
APGAMAEYMVVDDPRHLVPLGDLDPVRTVPLTDAGLTPYHAIKRSLPKLVPGSTAVVIGT
GGLGHVAIQLLRAMTAARVIALDVTEEKLALARTVGAHEAVLSDGAAAGHVRELTAGLGA
QAVFDFVGAPPTTALAGQLAAVEGDVTIVGIGGGTLAVGFGALPYEVSVTSPYWGSRAEL
IEVLDLARAGAVDVHVETYGIDEAPLAYERLHAGKINGRAVILPNG

NBRC No.	clone name	start	stop	length(bp)
G20-001-102	KS1E11L00013E12	2,559,284	2,595,176	35,893

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.