CDS Information : KSE_26470

Display	1000bp 10000bp 100000bp Clone

Kitasatospora setae NBRC 14216T chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kitasatospora setae NBRC 14216T
Replicon	chromosome
Start / Stop / Direction	2,953,434 / 2,953,988 / +
Location	2953434..2953988
Type	CDS
Length	555 bp (184 aa)

Product	hypothetical protein
Gene name
Functional category	similar to unknown proteins
EC number
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=1e-20 B5G8H1_9ACTO Superoxide dismutase [Cu-Zn] Alignment 2 E=2e-20 Q0RZ43_RHOSR Superoxide dismutase [Cu-Zn] Alignment 3 E=4e-19 C1BAR1_RHOOB Superoxide dismutase [Cu-Zn] Alignment 4 E=2e-18 C1YPT7_NOCDA Superoxide dismutase [Cu-Zn] Alignment 5 E=2e-16 D1X5K1_9ACTO Superoxide dismutase [Cu-Zn] Alignment
HAMAP	No significant hit
InterPro	No significant hit
SignalP	Bacteria, Gram-positive
TMHMM	No significant hit
SOSUI	Transmembrane 1

size of protein	184 amino acids
molecular mass	18,319.48 Da
pI	6
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 16.3 (30aa) 11.4 (21aa) 6.5 (12aa) 1.1 (2aa) 2.2 (4aa) 0.5 (1aa) 12.5 (23aa) 1.1 (2aa) 13 (24aa) 6 (11aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.3 (8aa) 1.1 (2aa) 1.1 (2aa) 2.2 (4aa) 1.1 (2aa) 0 (0aa) 4.9 (9aa) 5.4 (10aa) 6.5 (12aa) 2.7 (5aa)

>KSE_26470 hypothetical protein
ATGCCCCTGTCCTCCGCTGCCGGTGCGCTGTTGGTGCCGCTCGCCCTGCTGCCGGTCGGC
CCGCCCGGCGCCCAGCTCCCGGCGGGGTCCGGCGGCCCGGTCGCGCCGGGGGTCGACCGG
GTGGTGGACGCCCGCTTCGACCGGGCGGACGGCATCGTCCCGGCACGGGCGATCACCCAC
GCGCCCGACCTGGTCCCGTACGGCTCGCAGGTGCGGGTGACGGTCGGCCGGGCGGCCGGG
CACACCTCCGTCACGGTGGAGCTCGCCGGGGTGGCCGGCCCGCACGAGTTCCCGGCGCAC
GTGCACACCGGCTCCTGCGGCGCCGACCCGGCGGCCTCCGGACCGCACTACCAGCAGGTG
CCGGGGTCGGACGCCCCCGACAACGAGGTGCGGATGACGCTGCGGACCGACCCGGGCGGG
GCCGGCAGCGCCTCGGCGACCGTCCCGTGGGAGTTCCGGCCCGGCGAGGCGCACTCGCTG
GTGCTGCACGCGGGCAACCCGGCCGGGCCGCACGCCCCGGGCGACCGCGCGGCCTGCGTG
GACGTCGACTTCTGA


>KSE_26470 hypothetical protein
MPLSSAAGALLVPLALLPVGPPGAQLPAGSGGPVAPGVDRVVDARFDRADGIVPARAITH
APDLVPYGSQVRVTVGRAAGHTSVTVELAGVAGPHEFPAHVHTGSCGADPAASGPHYQQV
PGSDAPDNEVRMTLRTDPGGAGSASATVPWEFRPGEAHSLVLHAGNPAGPHAPGDRAACV
DVDF

NBRC No.	clone name	start	stop	length(bp)
G20-001-117	KS1E11L00014E07	2,928,185	2,963,924	35,740
G20-001-118	KS1E11L00005B03	2,950,867	2,988,465	37,599

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.