CDS Information : KSE_31490

Display	1000bp 10000bp 100000bp Clone

Kitasatospora setae NBRC 14216T chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kitasatospora setae NBRC 14216T
Replicon	chromosome
Start / Stop / Direction	3,552,766 / 3,552,314 / -
Location	complement(3552314..3552766)
Type	CDS
Length	453 bp (150 aa)

Product	putative ribosomal protein L15
Gene name	rplO
Functional category	- protein synthesis - - ribosomal proteins
EC number
Note
KEGG pathway	map:03010 KO:K02876
Sequence feature
References	HAMAP:MF_01341_B

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=2e-65 C9YW59_STRSW 50S ribosomal protein L15 Alignment 2 E=2e-65 RL15_STRCO 50S ribosomal protein L15 Alignment 3 E=1e-64 RL15_STRAW 50S ribosomal protein L15 Alignment 4 E=2e-64 B5HFF8_STRPR 50S ribosomal protein L15 Alignment 5 E=4e-64 D1WTB5_9ACTO Ribosomal protein L15 Alignment
HAMAP Database:HAMAP:20070519	MF_01341_B   RL15
InterPro Database:interpro:26.0	IPR000039 Ribosomal protein L18e (Family) PF00828   Ribosomal_L18e IPR001196 Ribosomal protein L15, conserved site (Conserved_site) PS00475   RIBOSOMAL_L15 IPR001196 Ribosomal protein L15 (Family) PS00475   RIBOSOMAL_L15 IPR005749 Ribosomal protein L15, bacterial form (Family) TIGR01071   rplO_bact: ribosomal protein L15 IPR021131 Ribosomal protein L18e/L15P (Domain) PF00828   Ribosomal_L18e SSF52080   Ribosomal proteins L15p and L18e IPR021131 Ribosomal protein L18e/L15 (Family) SSF52080   Ribosomal proteins L15p and L18e
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	150 amino acids
molecular mass	15,835.39 Da
pI	10.82
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 9.3 (14aa) 10 (15aa) 9.3 (14aa) 2.7 (4aa) 2 (3aa) 0 (0aa) 5.3 (8aa) 2 (3aa) 13.3 (20aa) 4 (6aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.3 (8aa) 0 (0aa) 3.3 (5aa) 4.7 (7aa) 1.3 (2aa) 12 (18aa) 2 (3aa) 4.7 (7aa) 3.3 (5aa) 5.3 (8aa)

>KSE_31490 putative ribosomal protein L15
ATGTCGGACTCGCCGATCAAGCTCCACAACCTGAAGCCCGCCCCGGGTGCCAAGAAGGAC
AAGATCCGCGTTGGTCGCGGTGAGGGCTCCAAGGGTAAGACTGCAGGTCGTGGCACCAAG
GGCACCAAGGCCCGCTACCAGGTTCCGCAGCGCTTCGAGGGTGGCCAGATGCCCCTCCAC
ATGCGCCTGCCGAAGCTGAAGGGCTTCAAGAACCCGGCCCACAAGCAGTTCCAGGTCGTG
AACCTGGACAAGCTGGCCGAGCTCTACCCGAACGGTGGCGAGGTCACCGTGGCCGGTCTG
GTCGAGAAGGGCGCCGTTCGCAAGAACGAGCTCGTCAAGGTCCTCGGCCAGGGCGACATC
GCGGTGGCGCTGCAGGTGACGGTCGACGCCGTCTCCGGCTCGGCCACCGAGAAGATCACC
GCGGCCGGCGGTTCGGTCACCGAACTGCTCTGA


>KSE_31490 putative ribosomal protein L15
MSDSPIKLHNLKPAPGAKKDKIRVGRGEGSKGKTAGRGTKGTKARYQVPQRFEGGQMPLH
MRLPKLKGFKNPAHKQFQVVNLDKLAELYPNGGEVTVAGLVEKGAVRKNELVKVLGQGDI
AVALQVTVDAVSGSATEKITAAGGSVTELL

NBRC No.	clone name	start	stop	length(bp)
G20-001-142	KS1E11L00044G03	3,519,333	3,557,060	37,728
G20-001-143	KS1E11L00012D06	3,544,110	3,581,445	37,336

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.