CDS Information : KSE_46510

Display	1000bp 10000bp 100000bp Clone

Kitasatospora setae NBRC 14216T chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kitasatospora setae NBRC 14216T
Replicon	chromosome
Start / Stop / Direction	5,146,508 / 5,143,713 / -
Location	complement(5143713..5146508)
Type	CDS
Length	2,796 bp (931 aa)

Product	putative phosphoenolpyruvate carboxylase
Gene name	ppc
Functional category	- metabolism of carbohydrates and related molecules - - specific pathways
EC number	4.1.1.31
Note
KEGG pathway	map:00620 KO:K01595
Sequence feature	144 (a.a.) ACT_SITE 589 (a.a.) ACT_SITE
References	HAMAP:MF_00595 Uniprot:Q9RNU9 Pubmed:8328954 Uniprot:O32483 Pubmed:9244286

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=0 B5HBI7_STRPR Phosphoenolpyruvate carboxylase Alignment 2 E=0 B5I7G9_9ACTO Phosphoenolpyruvate carboxylase Alignment 3 E=0 B1VUI2_STRGG Putative phosphoenolpyruvate carboxylase Alignment 4 E=0 CAPP_STRCO Phosphoenolpyruvate carboxylase Alignment 5 E=0 D1XQU2_9ACTO Phosphoenolpyruvate carboxylase Alignment
HAMAP Database:HAMAP:20070519	MF_00595   CAPP
InterPro Database:interpro:26.0	IPR001449 Phosphoenolpyruvate carboxylase (Family) PF00311   PEPcase PR00150   PEPCARBXLASE PS00393   PEPCASE_2 PS00781   PEPCASE_1 IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core (Domain) SSF51621   Phosphoenolpyruvate/pyruvate domain G3DSA:3.20.20.60   no description IPR018129 Phosphoenolpyruvate carboxylase, active site (Active_site) PS00781   PEPCASE_1 PS00393   PEPCASE_2 IPR021135 Phosphoenolpyruvate carboxylase, C-terminal region (Region) PF00311   PEPcase IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type (Family) MF_00595   CAPP_MF_00595
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	931 amino acids
molecular mass	103,330.91 Da
pI	5.84
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 11.9 (111aa) 6.2 (58aa) 13.4 (125aa) 3.8 (35aa) 2.3 (21aa) 1.2 (11aa) 4.5 (42aa) 1.2 (11aa) 7.1 (66aa) 4.7 (44aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6 (56aa) 0.2 (2aa) 1.8 (17aa) 3.4 (32aa) 2.3 (21aa) 1.8 (17aa) 3 (28aa) 10.3 (96aa) 6.6 (61aa) 8.3 (77aa)

>KSE_46510 putative phosphoenolpyruvate carboxylase
GTGACCGCTCCGGTCCCCACTCCGGCGGACAGCCCCTCCTCGATCGCCGACGCGGACAAC
GCCGCGCTGCGTGCGGACATCCGCCGCCTCGGCGACCTGCTCGGGGAGACCCTCGTGCGC
CAGGAGGGCCCCGAACTGCTGGGCCTGGTCGAGCAGGTGCGCCTGCTGAGCCGCACCGAC
GGCGAGGCGACGGCGCAGCTGCTCGCGGAGATCGACCTGGACACCGCCGCGAAGCTGGTG
CGCGCCTTCTCGACCTACTTCCACCTGGCGAACGTCACCGAGCAGGTGCACCGCGGCCGC
GAGTTCGCCGCCCGCCGGGCCCTGGAGGGCTCGGTGCTCTCGCAGACCGTCGACCAGCTG
AAGGAGGCGGACCCCAAGCACCTGGCCGACACCCTGGCCAACCTCTCGGTCCGCCCGGTG
TTCACCGCGCACCCGACCGAGGCGGCCCGCCGCTCGGTGCTGAACAAGCTGCGCCGGGTC
GGCGAGCTGCTGGAGCGGATCCACCGCGAGCAGGCCGCCACCGGCCGGGTCGACAGCGCC
CGGCAGACCTCGGCCCGCCGCCAGGCCGACCGCCGGCTCGCCGAGGTGATCGACCTGCTG
TGGCAGACCGACGAGCTGCGGATCGCCCGCCCGGAGCCCACCGACGAGGCCCGCAACGCC
GTCTACTACCTGGACGAGCTGTACCGCGAGGCCGTCCCGGAGGTACTGGAGGAGCTGCAC
GAGGAGCTGGCCCGGGTCGGCCTGACCCTGCCCGAGGGCGTCCGCCCGCTGACCTTCGGC
ACCTGGATCGGCGGCGACCGCGACGGCAACCCGAACGTCACCCCGCGGGTCACCTGGGAC
GTCCTCAACCTGCAGCACGAGTACGGCATCAAGGACGCCCTGGAGGCGGTCGACGACCTG
CGCGCCTCGCTCTCCACCTCGGTCCGGCTGGCCGGCGCCTCCGAGGAGCTGCTGGCCTCG
CTGGACGCCGACCTGGCGCACCTGCCCGAGCTGAGCCCGCGCTACAAGCGGATGAACGCC
GAGGAGCCGTACCGGCTCAAGGCCACCTGCATCCGGATCAAGCTGGAGAACACCCGCGAC
CGCCTCGCCGCCGGCACCGCGCCCACCCCGGGCCGCGACTACGTCGGCACCCGCGACCTG
ATCGCCGACCTGCGCCTGGTCCAGGACTCGCTGCGGGCGCACCGCGGCGGCCTGATCGCC
GACGGCCGGCTGGCCCGGACGATCCGCACCATCGAGGCGTTCGGCCTGCAGCTCGCCACC
ATGGACGTCCGCGAGCACGCCGAGGCCCACCACCACGCGCTCGGCCAGCTCTTCGACCGA
CTCGGCGAGGAGGCCTGGCGCTACACCGACATGCCGCGCGAGTACCGCCAGCGCCTGCTC
TCCAAGGAGATGCGCTCGCGCCGCCCGCTGGCCCCCACCCCGGCGCCGCTGGACGCCGCG
GGCGCCAAGACGCTGGGCGTGTTCACCACCATCCGCGAGGGCTTCGAGCGCTTCGGCGAC
GAGATCGTCGAGTCGTACATCATCTCGATGTGCCAGGGCGCGGACGACGTCTTCGCGGCC
GCCGTGCTGGCCCGCGAGGCCGGCCTGATCGACCTGCACGCGGGCATCGCCAAGATCGGC
ATCGTGCCGCTGCTGGAGACCACCGACGAGCTCCAGGAGGCCGACCGGATCCTGGACGAG
ATGCTCTCCGACCCGTCGTACCGGCTGCTGGTGTCGCTGCGCGGCGACGTCCAGGAGGTC
ATGCTCGGCTACTCGGACTCCTCCAAGTTCGGCGGCATCACCACCTCACAGTGGGAGATC
CACCGCGCCCAGCGCCGGCTGCGCGACGTCGCGCACCGCTACGGCATCCGGCTGCGGCTC
TTCCACGGCCGCGGCGGCACCGTCGGCCGCGGCGGCGGCCCCTCGCACGAGGCGATCCTG
GCCCAGCCGTGGGGCACCCTGGAGGGCGAGATCAAGGTCACCGAGCAGGGCGAGGTGATC
TCCGACAAGTACCTGCTGCCCTCGCTGGCCCGGGAGAACCTGGAGCTGACCCTCTCCGCC
ACACTGGCCGCGTCCGCGCTGCACACCGCGCCCCGGCAGGCCCCGGAGGAGCTGGCCCGC
TGGGACGCCGCGATGGACCGGGTCTCCGAGGCCGCGCACACCGCCTACCGGGCCCTGGTC
GAGCAGGAGGACCTGCCGAAGTACTTCTTCGCCGCGACGCCGGTCGACCAGCTCGCCTCG
CTGCACCTCGGCTCGCGCCCGTCCCGCCGCCCCGACAGCGGCGCCGGGCTGGACGGCCTG
CGGGCCATCCCGTGGGTGTTCGGCTGGACCCAGTCCCGGCAGATCGTGCCCGGCTGGTAC
GGCGTCGGCTCCGGCCTGGCCGCCGCCCGCGAGGCCGGCCTGGGCGACGTGCTCGACGAG
ATGCACGGCAACTGGCACTTCTTCCGCAACTTCCTGTCCAACGTCGCGATGACGCTGGCC
AAGACCGACCTGCGGATCGCCCGGCACTACGTCGAGCAGCTCGTCCCCGCCGAGCTGCAC
CACGTCTTCGAGCAGATCGTCGCCGAGCACGACCTCACCCTGCGCGAGGTGCTCCGGCTG
ACCGGCGAGAGCGAACTGCTGGAGCACAACGACGTCCTGAAGCAGACCTTCACCGTCCGC
GACGCCTACCTCGACCCGATCTCCTACCTGCAGGTCGCGCTGCTGCGCCGGCAGCGCGAG
GAGGTCGCGGCCGGCCGCCCGGAGGACCCGCTGCGCGCCCGCGCGCTGCTGCTCACCGTG
AACGGCATCGCGGCCGGCCTGCGCAACACCGGCTGA


>KSE_46510 putative phosphoenolpyruvate carboxylase
MTAPVPTPADSPSSIADADNAALRADIRRLGDLLGETLVRQEGPELLGLVEQVRLLSRTD
GEATAQLLAEIDLDTAAKLVRAFSTYFHLANVTEQVHRGREFAARRALEGSVLSQTVDQL
KEADPKHLADTLANLSVRPVFTAHPTEAARRSVLNKLRRVGELLERIHREQAATGRVDSA
RQTSARRQADRRLAEVIDLLWQTDELRIARPEPTDEARNAVYYLDELYREAVPEVLEELH
EELARVGLTLPEGVRPLTFGTWIGGDRDGNPNVTPRVTWDVLNLQHEYGIKDALEAVDDL
RASLSTSVRLAGASEELLASLDADLAHLPELSPRYKRMNAEEPYRLKATCIRIKLENTRD
RLAAGTAPTPGRDYVGTRDLIADLRLVQDSLRAHRGGLIADGRLARTIRTIEAFGLQLAT
MDVREHAEAHHHALGQLFDRLGEEAWRYTDMPREYRQRLLSKEMRSRRPLAPTPAPLDAA
GAKTLGVFTTIREGFERFGDEIVESYIISMCQGADDVFAAAVLAREAGLIDLHAGIAKIG
IVPLLETTDELQEADRILDEMLSDPSYRLLVSLRGDVQEVMLGYSDSSKFGGITTSQWEI
HRAQRRLRDVAHRYGIRLRLFHGRGGTVGRGGGPSHEAILAQPWGTLEGEIKVTEQGEVI
SDKYLLPSLARENLELTLSATLAASALHTAPRQAPEELARWDAAMDRVSEAAHTAYRALV
EQEDLPKYFFAATPVDQLASLHLGSRPSRRPDSGAGLDGLRAIPWVFGWTQSRQIVPGWY
GVGSGLAAAREAGLGDVLDEMHGNWHFFRNFLSNVAMTLAKTDLRIARHYVEQLVPAELH
HVFEQIVAEHDLTLREVLRLTGESELLEHNDVLKQTFTVRDAYLDPISYLQVALLRRQRE
EVAAGRPEDPLRARALLLTVNGIAAGLRNTG

NBRC No.	clone name	start	stop	length(bp)
G20-001-208	KS1E11L0002602	5,118,960	5,154,986	36,027

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.