CDS Information : KSE_51930

Display	1000bp 10000bp 100000bp Clone

Kitasatospora setae NBRC 14216T chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kitasatospora setae NBRC 14216T
Replicon	chromosome
Start / Stop / Direction	5,770,195 / 5,771,127 / +
Location	5770195..5771127
Type	CDS
Length	933 bp (310 aa)

Product	putative signal peptidase I
Gene name
Functional category	- protein modification
EC number	3.4.21.89
Note
KEGG pathway	map:03060 KO:K03100
Sequence feature
References	Merops:S26 Uniprot:O54237 Pubmed:10520736

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=1e-54 D1XE76_9ACTO Signal peptidase I Alignment 2 E=3e-51 O69884_STRCO Putative signal peptidase I Alignment 3 E=3e-51 Q798K9_STRLI Signal peptidase I Alignment 4 E=4e-51 B5HFJ1_STRPR Signal peptidase I Alignment 5 E=3e-49 B4V1P7_9ACTO Signal peptidase Alignment
HAMAP	No significant hit
InterPro Database:interpro:26.0	IPR000223 Peptidase S26A, signal peptidase I (Family) PR00727   LEADERPTASE PS00761   SPASE_I_3 TIGR02227   sigpep_I_bact: signal peptidase I IPR011056 Peptidase S24, S26A and S26B, C-terminal (Domain) G3DSA:2.10.109.10   no description PF00717   Peptidase_S24 IPR015927 Peptidase S24, S26A, S26B and S26C (Domain) SSF51306   LexA/Signal peptidase IPR019758 Peptidase S26A, signal peptidase I, conserved site (Conserved_site) PS00761   SPASE_I_3 IPR019759 Peptidase S24/S26A/S26B, conserved region (Region) PF00717   Peptidase_S24
SignalP	No significant hit
TMHMM	Transmembrane 1
SOSUI	Transmembrane 1

size of protein	310 amino acids
molecular mass	31,420.70 Da
pI	4.5
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 11 (34aa) 7.7 (24aa) 6.5 (20aa) 2.9 (9aa) 2.6 (8aa) 1.3 (4aa) 9 (28aa) 1.6 (5aa) 16.5 (51aa) 8.1 (25aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 5.2 (16aa) 1 (3aa) 1 (3aa) 1.6 (5aa) 1.3 (4aa) 1.3 (4aa) 1.6 (5aa) 7.1 (22aa) 9.7 (30aa) 3.2 (10aa)

>KSE_51930 putative signal peptidase I
ATGAGCACGCACGAGCCACCGACGGACCGCGACGGCAGTCCCGCATCCACGGGTGCGGAC
AGGCCGTCGCGGTCCGCCGCCGTTTCCGCCCCCGGAACGCCTTCCGGCGTCGGTACCGGC
ACCACCACGGCCCCCGGGCCCGGACCCGGCCCTGACCCGGAGCCCCGAGGCGGCGCGGGC
TCCGGCGCCGACTCCAGCAGCGCCTCCGGCACCGACGACAGCGGTTCCGAGGGCGATGCC
GACGCCGACGGCGATGCCGACGGAGGCGGGCGGCGGTGGTCGCGGGACCTGCTGTGGATC
GCCGCGATCTGCGTGACCGCGCTGCTGCTGGTGAACGCCTTCGTGGCGCGGCCGTTCGCG
GTGCCGTCCGGCTCGATGGAGGGGACGCTGCAGCCGGGTGACCGGGTGCTGGTCAACCAG
CTCGCGTACGCCTTCGGCGGGCACCCCCAGCGGGGCGACGTGGTGGTCTTCGACGGCATC
GGCTCCTTCCTGCCGTACCAGGACGAACCGTCCGGCGTGAAGCGGCTGTTGGTCGGCGCG
GGCCTGGCTCCGGCCGGCGACACGGTGTACGTGAAGCGGGTGATCGGCGTCGGGGGTGAC
CGGATCACCTGTTGCGGCACCGACGGCAGGCTCCGGATCAACGGGGTGCCGCTGGACGAG
AGCGCGTACCTGCTCCCCGGTGACGCGCCGTCGGCGGTGCCGTTCGACATCGTGGTCCCC
GACGGCAAGTTGTGGATGATGGGCGACCACCGCAGCGCCTCCCGCGACTCCCGTGACCAC
CTCGGCGAGCCCGGTGGCGGCGCCGTGCCCGAGGACAAGGTGATCGGCCGCGCCGACTGG
GTGATGTTCCCCCTCGGCCGCGCGACCTCCCTCGACCGACCGGCGGCGTTCGCCGCGATT
GAGGGGACCGGTGGCCATGGGGAGCAGAGGTAG


>KSE_51930 putative signal peptidase I
MSTHEPPTDRDGSPASTGADRPSRSAAVSAPGTPSGVGTGTTTAPGPGPGPDPEPRGGAG
SGADSSSASGTDDSGSEGDADADGDADGGGRRWSRDLLWIAAICVTALLLVNAFVARPFA
VPSGSMEGTLQPGDRVLVNQLAYAFGGHPQRGDVVVFDGIGSFLPYQDEPSGVKRLLVGA
GLAPAGDTVYVKRVIGVGGDRITCCGTDGRLRINGVPLDESAYLLPGDAPSAVPFDIVVP
DGKLWMMGDHRSASRDSRDHLGEPGGGAVPEDKVIGRADWVMFPLGRATSLDRPAAFAAI
EGTGGHGEQR

NBRC No.	clone name	start	stop	length(bp)
G20-001-233	KS1E11L00037A02	5,738,322	5,774,271	35,950
G20-001-234	KS1E11L00050D12	5,760,616	5,796,641	36,026

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.