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CDS Information : KSE_51930

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close this sectionGenomic map

Display Clone

Kitasatospora setae NBRC 14216T chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Kitasatospora setae NBRC 14216T
Replicon chromosome
Start / Stop / Direction 5,770,195 / 5,771,127 / +
Location 5770195..5771127
Type CDS
Length 933 bp (310 aa)

close this sectionAnnotation

Product putative signal peptidase I
Gene name
Functional category
- protein modification
EC number 3.4.21.89
Note
KEGG pathway map:03060 KO:K03100
Sequence feature
References Merops:S26
Uniprot:O54237 Pubmed:10520736

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-54D1XE76_9ACTOSignal peptidase IAlignment
2E=3e-51O69884_STRCOPutative signal peptidase IAlignment
3E=3e-51Q798K9_STRLISignal peptidase IAlignment
4E=4e-51B5HFJ1_STRPRSignal peptidase IAlignment
5E=3e-49B4V1P7_9ACTOSignal peptidaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR000223 Peptidase S26A, signal peptidase I (Family)
 [114-130]  5.5e-20 PR00727 [190-202]  5.5e-20 PR00727 [239-258]  5.5e-20 PR00727
PR00727   LEADERPTASE
 [244-257]  PS00761
PS00761   SPASE_I_3
 [99-286]  2e-41 TIGR02227
TIGR02227   sigpep_I_bact: signal peptidase I
IPR011056 Peptidase S24, S26A and S26B, C-terminal (Domain)
 [109-305]  2.7e-29 G3DSA:2.10.109.10
G3DSA:2.10.109.10   no description
 [121-204]  1.8e-13 PF00717
PF00717   Peptidase_S24
IPR015927 Peptidase S24, S26A, S26B and S26C (Domain)
 [112-291]  6.5e-43 SSF51306
SSF51306   LexA/Signal peptidase
IPR019758 Peptidase S26A, signal peptidase I, conserved site (Conserved_site)
 [244-257]  PS00761
PS00761   SPASE_I_3
IPR019759 Peptidase S24/S26A/S26B, conserved region (Region)
 [121-204]  1.8e-13 PF00717
PF00717   Peptidase_S24
SignalP No significant hit
TMHMM
 [97-116]  Transmembrane (i-o)
Transmembrane 1   
SOSUI
 [97-119]  Transmembrane
Transmembrane 1   

close this sectionCalculated information (Amino acid sequence)

size of protein 310 amino acids
molecular mass 31,420.70 Da
pI 4.5
aa composition
AlaValLeuIlePheTrpProMetGlySer
11
(34aa)
7.7
(24aa)
6.5
(20aa)
2.9
(9aa)
2.6
(8aa)
1.3
(4aa)
9
(28aa)
1.6
(5aa)
16.5
(51aa)
8.1
(25aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.2
(16aa)
1
(3aa)
1
(3aa)
1.6
(5aa)
1.3
(4aa)
1.3
(4aa)
1.6
(5aa)
7.1
(22aa)
9.7
(30aa)
3.2
(10aa)

open this sectionSequence

close this sectionCovered clones

NBRC No. clone name start stop length(bp)
G20-001-233 KS1E11L00037A02 5,738,322 5,774,271 35,950
G20-001-234 KS1E11L00050D12 5,760,616 5,796,641 36,026

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.