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CDS Information : KSE_52620

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Kitasatospora setae NBRC 14216T chromosome

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Overview 
Genome

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Organism Kitasatospora setae NBRC 14216T
Replicon chromosome
Start / Stop / Direction 5,834,665 / 5,835,765 / +
Location 5834665..5835765
Type CDS
Length 1,101 bp (366 aa)

close this sectionAnnotation

Product hypothetical protein
Gene name
Functional category similar to unknown proteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0B5GDA3_9ACTOPutative uncharacterized proteinAlignment
2E=0B5HFL0_STRPRPutative uncharacterized proteinAlignment
3E=0B5GZ31_STRCLPutative uncharacterized proteinAlignment
4E=0D1XE94_9ACTORadical SAM enzyme, Cfr familyAlignment
5E=1e-180D1WZF3_9ACTORadical SAM enzyme, Cfr familyAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR004383 Ribosomal RNA large subunit methyltransferase RlmN; (Family)
 [1-364]  1.5e-180 PIRSF006004
PIRSF006004   Predicted radical SAM enzyme, Cfr type
 [14-365]  7.1e-95 TIGR00048
TIGR00048   TIGR00048: radical SAM enzyme, Cfr family
 [20-366]  35.825 MF_01849
MF_01849   RLMN_MF_01849
IPR006638 Elongator protein 3/MiaB/NifB (Domain)
 [118-340]  0.0048 SM00729
SM00729   no description
IPR007197 Radical SAM (Domain)
 [123-294]  5.4e-10 PF04055
PF04055   Radical_SAM
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 366 amino acids
molecular mass 40,219.81 Da
pI 7.47
aa composition
AlaValLeuIlePheTrpProMetGlySer
10.1
(37aa)
7.1
(26aa)
10.1
(37aa)
3.3
(12aa)
2.5
(9aa)
1.6
(6aa)
6.6
(24aa)
2.7
(10aa)
7.7
(28aa)
6.3
(23aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.7
(21aa)
1.9
(7aa)
3.3
(12aa)
2.7
(10aa)
1.4
(5aa)
3
(11aa)
1.9
(7aa)
9.6
(35aa)
6.3
(23aa)
6.3
(23aa)

open this sectionSequence