CDS Information : KSE_53800

Display	1000bp 10000bp 100000bp Clone

Kitasatospora setae NBRC 14216T chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Kitasatospora setae NBRC 14216T
Replicon	chromosome
Start / Stop / Direction	5,995,220 / 5,996,980 / +
Location	5995220..5996980
Type	CDS
Length	1,761 bp (586 aa)

Product	putative siderophore biosynthesis protein
Gene name
Functional category	Other functions - miscellaneous
EC number
Note
KEGG pathway
Sequence feature
References	Uniprot:Q9Z3R0 Pubmed:11274118 Uniprot:Q47316 Pubmed:3087960

BLASTP Database:UniProtKB:2010_04 show BLAST table	1 E=0 B5H8X2_STRPR Rhizobactin siderophore biosynthesis protein rhbC Alignment 2 E=0 C9NBC0_9ACTO IucA/IucC family protein Alignment 3 E=0 D1XHF1_9ACTO IucA/IucC family protein Alignment 4 E=1e-180 D1WVN4_9ACTO IucA/IucC family protein Alignment 5 E=1e-179 Q82KD7_STRAW Putative siderophore biosynthesis protein/iron transport protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:26.0	IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal (Domain) PF04183   IucA_IucC IPR007310 IucA/IucC (Family) PF04183   IucA_IucC IPR008090 Ferric iron reductase (Family) PF06276   FhuF IPR022770 FhuF/siderophore biosynthesis protein, C-terminal (Domain) PF06276   FhuF
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	586 amino acids
molecular mass	62,558.10 Da
pI	6.58
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 14.3 (84aa) 6 (35aa) 14.3 (84aa) 2.4 (14aa) 1.9 (11aa) 2.2 (13aa) 8.5 (50aa) 0.5 (3aa) 9 (53aa) 4.8 (28aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6 (35aa) 0.9 (5aa) 1.5 (9aa) 2.7 (16aa) 1.5 (9aa) 0.9 (5aa) 4.1 (24aa) 7.8 (46aa) 5.6 (33aa) 4.9 (29aa)

>KSE_53800 putative siderophore biosynthesis protein
TTGGCCAGCACCCTCACCGGCGTCCCCCCGGCCGTCCAGCCGGCGGCCGGGCACCCCGCC
CCGGACCCGCTGCTCGACCCCGACCCGGCCGTCGCCGCCGAACACGCCGCCACCGAGAGC
CTGTTGCGCTGCTGGGCCCGGGAGACCGCGGCCGAGCGCCCCGACGGCGACCTGCTGCGG
ATCCCGGTGCTCGGCGGCGCCGCCGAGCTCTCCGCGCCGGTCCGGCACTGGTCGGCCTGC
GGCTGGCACCGCTTCGGCCCGGCCGCCGTCTCCACCGGCACCGCCGGGCACCCGGTCGAC
GCGGTCACCGTCGCCGCCCTGGTGGCCGGCGCCACCGGCCGCCCCGAACCCGGCCAACTC
GCCGACCTCACCGCCCGGGTGGCCGACTCGGTCGGCCGCACCGCCGAGATCCTCACCCAC
CGCCGGACGATCTCCGCCGCGCCCGCCGACCCGTTCCTGCGCGCCGAGCAGTCGCTGCTG
CTCGGCCACCCGCTGCACCCCACCCCGAAGAGCCGCGACGGCCTCGGCCCCGCCCAGTCC
GCCGCGTACTCCCCGGAGCTGCACGGCAGCTTCCGGCTGCACTGGTGGGCCGCGCACCGC
TCGCTGCTGGCCGGCGACTCGGCCGCCGGCACCCCGGTCGAGCGGCTCACCGCCGAGCTG
TACGGCCGCACCCCGCCCGCCGGGACCGCCGTGCTGCCGCTGCACCCCTGGCAGGCCCGG
GAGCTGGCGCTGCGCCCGGCCGTCGCCGAACTGCTGGAGCTCGGCCTGCTCACCGACCTC
GGCCAGCACGGCGAGCCCTGGCACCCCACCAGCTCGGTGCGCACCGTCTGCCGGCCCGGC
ACCCCGTGGATGCTCAAGCTCTCGCTGGGCCTGCGGATCACCAACTCCCGCCGGGAGAAC
CTCCGCAAGGAACTGCACCGCGGCGCCGAGGTGCACCGGCTGCTGGAGGCCGGCCTGTCC
GACCGCTGGAAGGCCGCCCACCCCGGTTTCGACATCGTCCGCGACCCGGCCTGGATCGGC
GTCGACCACCCCGCGCTGGCCGACCCCAACGGCCTGGACACCGTGCTGCGGCAGATGCCG
TTCGGCCCCGCCGACCGGGCGCTCTGCGTCGCCGGACTGGTCGCCGAGCAGCCGATCGGC
CGACTCGACTCGCAACTGTCGGACATCATCGGCGAGTTGGCCGCCCGCACCGGCCGCTCC
ACGCCGACCGTCGCCACCGAGTGGTTCCTCCGCTACCTGGACGCCGTCGTCCTGCCGATC
CTCTGGCTGGACGGGCAGGCCGGCATCGCCCTGGAGGCCCACCAGCAGAACAGCCTGGTC
CTGCTGGACACCCTCGGCTGGCCCACCGGCGGCCGCTACCGCGACAACCAGGGCTACTAC
TTCCGCGCCTCGCACGCCGACCGGCTGCGCGCCCTGCTGCCCAACCTCGGCGAGCACAGC
GACACCTTCGTGCCCGACCCGGTCGCCGACGAGCGCTTCGCCTACTACCTCGGCATCAAC
CACGTCCTCGGCCTGATCGGCGCCTTCGGCTCCCAGGGCCTCGCCGACGAACAGCTGCTG
CTGGCCGCGTTGCGCCGCTTCCTGGCCGGCCCCGCCGCCACCGCCACCGGCTCCGGGCTG
CCCGCCCACCTGCTGGACGCCCCCACCCTGCGCTGCAAGGCCAACCTGCTCACCCGGCTG
CACGGCCTGGACGAACTGGTCGGCCCGGTCGAGACCCAGTCGGTGTACGTCGAGATCGAC
AACCCGGTGGCCCGGGCGTGA


>KSE_53800 putative siderophore biosynthesis protein
MASTLTGVPPAVQPAAGHPAPDPLLDPDPAVAAEHAATESLLRCWARETAAERPDGDLLR
IPVLGGAAELSAPVRHWSACGWHRFGPAAVSTGTAGHPVDAVTVAALVAGATGRPEPGQL
ADLTARVADSVGRTAEILTHRRTISAAPADPFLRAEQSLLLGHPLHPTPKSRDGLGPAQS
AAYSPELHGSFRLHWWAAHRSLLAGDSAAGTPVERLTAELYGRTPPAGTAVLPLHPWQAR
ELALRPAVAELLELGLLTDLGQHGEPWHPTSSVRTVCRPGTPWMLKLSLGLRITNSRREN
LRKELHRGAEVHRLLEAGLSDRWKAAHPGFDIVRDPAWIGVDHPALADPNGLDTVLRQMP
FGPADRALCVAGLVAEQPIGRLDSQLSDIIGELAARTGRSTPTVATEWFLRYLDAVVLPI
LWLDGQAGIALEAHQQNSLVLLDTLGWPTGGRYRDNQGYYFRASHADRLRALLPNLGEHS
DTFVPDPVADERFAYYLGINHVLGLIGAFGSQGLADEQLLLAALRRFLAGPAATATGSGL
PAHLLDAPTLRCKANLLTRLHGLDELVGPVETQSVYVEIDNPVARA

NBRC No.	clone name	start	stop	length(bp)
G20-001-243	KS1E11L00012A08	5,982,667	6,018,179	35,513

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.