CDS Information : MCP_0005

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Methanocella paludicola SANAET (= NBRC 101707T) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Methanocella paludicola SANAET (= NBRC 101707T)
Replicon	chromosome
Start / Stop / Direction	3,986 / 3,489 / -
Location	complement(3489..3986)
Type	CDS
Length	498 bp (165 aa)

Product	hypothetical protein
Gene name
Functional category	Unknown Function - Similar to unknown protein
EC number
Note	Contains one Cupin 2, conserved barrel domain (IPR013096).
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:15.0 show BLAST table	1 E=1e-30 Q0W5H9_UNCMA Putative uncharacterized protein Alignment 2 E=6e-09 Q1CYQ8_MYXXD Cupin domain protein Alignment 3 E=2e-07 B7A6V5_THEAQ Cupin 2 conserved barrel domain protein Alignment 4 E=1e-06 Q5SM39_THET8 Putative uncharacterized protein TTHA0104 Alignment 5 E=1e-06 Q72GE8_THET2 Hypothetical conserved protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR011051 Cupin, RmlC-type (Domain) SSF51182   RmlC-like cupins IPR013096 Cupin 2, conserved barrel (Domain) PF07883   Cupin_2 IPR014710 RmlC-like jelly roll fold (Domain) G3DSA:2.60.120.10   no description
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	165 amino acids
molecular mass	17,688.19 Da
pI	6.74
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 10.9 (18aa) 8.5 (14aa) 7.9 (13aa) 3.6 (6aa) 4.8 (8aa) 0.6 (1aa) 8.5 (14aa) 0.6 (1aa) 10.3 (17aa) 4.8 (8aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.8 (8aa) 4.2 (7aa) 3 (5aa) 1.8 (3aa) 3.6 (6aa) 3 (5aa) 1.8 (3aa) 6.7 (11aa) 4.2 (7aa) 6.1 (10aa)

>MCP_0005 hypothetical protein
TTGGAAGTATACCGCATCGACATACCGGAGGGCGGCGGGCCGGTGAGCCTGAGGGCCTGC
CCCATAAAGACCGATAAGGTGGCCTTCAACGTGTACTCGTTCCGGCCCTGGCAGGCGCTG
TCCGCGCACCGGCACCCGGGCAGCGACGAGGTGTTCTTCGTCGTGGACGGCCGGTGCCTG
TTCTACGTGGGCAGGGACACGGAGGCCCTGGGGCCGAATAACGCCGTCTACGTGCCGTCC
GGCGCCCTCCACGCCATTCTGTCGTGCGAGAGGGGGGCCACGCTCGTCTCGGTCCAGGGG
CCTCAGCCGGTCACGTCCATCTACGGGAACCTGAAGTACTTCTGCCCTGCCTGCGGCCTT
GAGGCCCCGCTTCTGGAGGGCACGCGGACGGGCGACCTTAACACCTGTCCCCGGTGCAAG
ACGGCCGTGCGCCTGAAGGAGGCGGGCGAGGCGTTCGACGCCTTTGAGATCGCGCCTCCC
GGGGGCGCGCGGGCGTGA


>MCP_0005 hypothetical protein
MEVYRIDIPEGGGPVSLRACPIKTDKVAFNVYSFRPWQALSAHRHPGSDEVFFVVDGRCL
FYVGRDTEALGPNNAVYVPSGALHAILSCERGATLVSVQGPQPVTSIYGNLKYFCPACGL
EAPLLEGTRTGDLNTCPRCKTAVRLKEAGEAFDAFEIAPPGGARA

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.