CDS Information : MCP_0018

Display	1000bp 10000bp 100000bp Clone

Methanocella paludicola SANAET (= NBRC 101707T) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Methanocella paludicola SANAET (= NBRC 101707T)
Replicon	chromosome
Start / Stop / Direction	13,274 / 12,627 / -
Location	complement(12627..13274)
Type	CDS
Length	648 bp (215 aa)

Product	conserved hypothetical protein
Gene name
Functional category	Unknown Function - Similar to unknown protein
EC number
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:15.0 show BLAST table	1 E=4e-92 Q0W5G3_UNCMA Putative uncharacterized protein Alignment 2 E=6e-22 O27982_ARCFU Putative uncharacterized protein Alignment 3 E=2e-12 A4FZ66_METM5 Putative uncharacterized protein Alignment 4 E=1e-11 A9A6J8_METM6 Putative uncharacterized protein Alignment 5 E=2e-11 A6VJ69_METM7 Putative uncharacterized protein Alignment
HAMAP	No significant hit
InterPro	No significant hit
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	215 amino acids
molecular mass	24,285.92 Da
pI	6.76
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 6.5 (14aa) 11.2 (24aa) 7.4 (16aa) 4.2 (9aa) 3.3 (7aa) 0.5 (1aa) 5.6 (12aa) 2.8 (6aa) 4.2 (9aa) 5.6 (12aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6 (13aa) 4.2 (9aa) 4.2 (9aa) 2.8 (6aa) 4.7 (10aa) 6 (13aa) 2.8 (6aa) 5.6 (12aa) 6 (13aa) 6.5 (14aa)

>MCP_0018 conserved hypothetical protein
GTGACAATTGTTGTTAGTGAAGACGACGAAGATGCGGATTATAGTCCGTTTGCCTTTTTA
GAAACGACTGTCAAGAACGATATTTTGAACGTATCGCACGATTACCGGTACCAGAAAATG
GGGTATTACGTATCGATGCACGCGGAACTTTGCGGATGCAACGTGACCCCCCGCTGTTCG
GACATCCTTGACACGCACAGAAATCCTCTGCTGATGATCAGGGCGTCCAGGGCGGGCATC
CCGTGCCTGCCGTACAGGCTGGTCGCCGGGGACGAGCGCAACATGGGCTGCCCGGCGTTA
TGCTTCGCGGTGAACCCGTACACGTGCAACTCGGTTACCCAGGTCAAGACGGAGTCCCAA
TTATACCGGACTCTGAAGAGCCTGAGCGTTAACAACCGCTACCCGGTCTCGGTTCAGCCC
CTGGTCGGGGAGGTAAAGGAGGCCGTGCAGGTCTTCGGGGAGACGGACGTGCCCGAGGCG
CGCTCCATCGCGAAGAAGTTCTACGAGACCTTCAGGATACCCATCGGCAAGCTGATCGTG
CAGATGGTGGATGGCGAGGCAAAGCTGTGCCACTTCGAGCCCACGACGAAGAAAGAGGTG
GACTGGGCCCTGGTCAGGGATAAGGTGCACGCCGTAAAGTGCCACTAA


>MCP_0018 conserved hypothetical protein
MTIVVSEDDEDADYSPFAFLETTVKNDILNVSHDYRYQKMGYYVSMHAELCGCNVTPRCS
DILDTHRNPLLMIRASRAGIPCLPYRLVAGDERNMGCPALCFAVNPYTCNSVTQVKTESQ
LYRTLKSLSVNNRYPVSVQPLVGEVKEAVQVFGETDVPEARSIAKKFYETFRIPIGKLIV
QMVDGEAKLCHFEPTTKKEVDWALVRDKVHAVKCH

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.