CDS Information : MCP_0024

Display	1000bp 10000bp 100000bp Clone

Methanocella paludicola SANAET (= NBRC 101707T) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Methanocella paludicola SANAET (= NBRC 101707T)
Replicon	chromosome
Start / Stop / Direction	16,389 / 17,102 / +
Location	16389..17102
Type	CDS
Length	714 bp (237 aa)

Product	conserved hypothetical protein
Gene name
Functional category	Unknown Function - Similar to unknown protein
EC number
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:15.0 show BLAST table	1 E=3e-43 B9LTF4_9EURY Putative circadian clock protein, KaiC Alignment 2 E=3e-43 A7U110_9EURY Circadian regulator Alignment 3 E=1e-39 Q5V0B5_HALMA Circadian regulator Alignment 4 E=5e-24 B7R245_9EURY Circadian clock protein kinase KaiC, putative Alignment 5 E=1e-21 Q5JDZ8_PYRKO ATPase, RecA superfamily Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR010624 Circadian clock protein KaiC (Domain) PS51146   KAIC IPR010624 Circadian clock protein KaiC (Family) PS51146   KAIC
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	237 amino acids
molecular mass	26,161.16 Da
pI	5.12
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 5.9 (14aa) 6.8 (16aa) 7.6 (18aa) 8 (19aa) 4.6 (11aa) 0.8 (2aa) 5.1 (12aa) 5.9 (14aa) 11.8 (28aa) 7.2 (17aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.6 (11aa) 0.4 (1aa) 2.5 (6aa) 1.7 (4aa) 4.2 (10aa) 3 (7aa) 0.8 (2aa) 7.2 (17aa) 5.5 (13aa) 6.3 (15aa)

>MCP_0024 conserved hypothetical protein
ATGGCGCAACACATCGATTACGTCAGCACGGGGGTGCCCGGAGCTGACACTATTTTAAAC
GGCGGCATCTACCCAGGGTCCGCCGTGCTCGTCTCGGGGCCGCCCGGCTCGGGAAAGTCC
ATATTCGGCATGCAGTTCGTTTATGCGGGGGCCAGGGACCACGGCGAGGGCGGGCTCATC
GTGGCCATCGAGGAGACCGACCGGTCCCTGTCCGAGTACGCGGGCTCCATAGGGCTGGAG
GCCTGGGACAGCCTGGTGGAGAAGGGCGCCATCACCATGATGACGGACGACTACTTCGCG
AGGACCGACCTTCCCGGCTCGCTTGAGGGCATCATGGAGGTGCTGGGCAGGACGGAAGCG
AGGCGGATGGTCATCGACCCCATGAACCTCTTCAAGTACTACTTCCCCCAGGACGTGGAC
CGGCGGAGGTATTTATTGAAATTCATCCGGATCCTCAAAAGGCGCGGCATCACCTCCCTG
ATCATTTCGGAGGCCATGGGGGTGTTCCCCAACATGCCCCTGACAGAGGAGATGTACATG
ACCGACGGGAACATCAGCCTCTTCCTGTCCAGGTCGGGGAACAACGTGGAGCGGTGCTTC
TGGGTGACCAAGATGAGGCGCCAGGCGTTCAGCATGAAGATCGTGCCCATGGGCATCGGG
CGGGGAGGCATCGAGGTGTTCCCCGACGCGGTGCCGTACTCTCTAGGGGAGTAG


>MCP_0024 conserved hypothetical protein
MAQHIDYVSTGVPGADTILNGGIYPGSAVLVSGPPGSGKSIFGMQFVYAGARDHGEGGLI
VAIEETDRSLSEYAGSIGLEAWDSLVEKGAITMMTDDYFARTDLPGSLEGIMEVLGRTEA
RRMVIDPMNLFKYYFPQDVDRRRYLLKFIRILKRRGITSLIISEAMGVFPNMPLTEEMYM
TDGNISLFLSRSGNNVERCFWVTKMRRQAFSMKIVPMGIGRGGIEVFPDAVPYSLGE

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.