CDS Information : MCP_0030

Display	1000bp 10000bp 100000bp Clone

Methanocella paludicola SANAET (= NBRC 101707T) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Methanocella paludicola SANAET (= NBRC 101707T)
Replicon	chromosome
Start / Stop / Direction	22,411 / 22,920 / +
Location	22411..22920
Type	CDS
Length	510 bp (169 aa)

Product	conserved hypothetical protein
Gene name
Functional category	Unknown Function - Similar to unknown protein
EC number
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:15.0 show BLAST table	1 E=6e-67 Q0W5C5_UNCMA Putative uncharacterized protein Alignment 2 E=3e-42 A1TLS1_ACIAC Transferase hexapeptide repeat containing protein Alignment 3 E=5e-42 Q3KHK2_PSEPF Transferase hexapeptide repeat Alignment 4 E=5e-42 A6V114_PSEA7 Putative uncharacterized protein Alignment 5 E=8e-42 Q1I5Y0_PSEE4 Putative transferase family protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR001451 Bacterial transferase hexapeptide repeat (Repeat) PF00132   Hexapep IPR011004 Trimeric LpxA-like (Domain) SSF51161   Trimeric LpxA-like enzymes
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	169 amino acids
molecular mass	18,027.74 Da
pI	6.51
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 8.9 (15aa) 13.6 (23aa) 4.1 (7aa) 8.3 (14aa) 1.2 (2aa) 0.6 (1aa) 3 (5aa) 3 (5aa) 11.2 (19aa) 7.1 (12aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 3.6 (6aa) 1.8 (3aa) 1.8 (3aa) 3 (5aa) 3 (5aa) 6.5 (11aa) 2.4 (4aa) 4.7 (8aa) 4.1 (7aa) 8.3 (14aa)

>MCP_0030 conserved hypothetical protein
ATGATCATCCAGCATTTCTCAAAGCCTTCCATCGACCCCTCCGCCTTCGTCGCTGAAACG
GCGGTCGTCGCGGGCAGCGTGCGCCTGGAGGAGGAGTCCAGCGTCTGGTACGGCGCCGTC
CTCCGGGGAGACGAGGCCACCATCACTGTTTCTAAGAAAGCCAACGTCCAGGACAACGCC
GTGGTGCACTCTGACCGGGGGGAGGACGTCCTCATCGGCGAGGGGGTCACCGTCGGCCAC
GGGGCCATCATCCACGGCTGCACCGTGGGCAAGTACTCCATGATCGGCATGGGCGCCATC
ATTTTAAGCAAAGCTCAGGTCGGCGAGCGCTGCATCATCGGCGCGGGCGCCGTGGTAAAG
GAGAAGGATGTCATACCGGACGGCTCCATGGTGGTCGGCGTACCCGGCAAAGTGATCAGG
CAGCTCACGCCGGAGCAGATGAAGTACCTCGAGGGCAACTGCGAGGAGTACGTGCGGCTG
GCCCGTAAATACCGGGAGGCATCGAAGTGA


>MCP_0030 conserved hypothetical protein
MIIQHFSKPSIDPSAFVAETAVVAGSVRLEEESSVWYGAVLRGDEATITVSKKANVQDNA
VVHSDRGEDVLIGEGVTVGHGAIIHGCTVGKYSMIGMGAIILSKAQVGERCIIGAGAVVK
EKDVIPDGSMVVGVPGKVIRQLTPEQMKYLEGNCEEYVRLARKYREASK

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.