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CDS Information : MCP_0618

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close this sectionGenomic map

Display Clone

Methanocella paludicola SANAET (= NBRC 101707T) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Methanocella paludicola SANAET (= NBRC 101707T)
Replicon chromosome
Start / Stop / Direction 598,217 / 600,121 / +
Location 598217..600121
Type CDS
Length 1,905 bp (634 aa)

close this sectionAnnotation

Product tungsten-containing aldehyde ferredoxin oxidoreductase
Gene name
Functional category Metabolism
- Energy Metabolism
EC number 1.2.7.5
Note MCP_0618 and MCP_0658 are similar to each other.
KEGG pathway
Sequence feature

290 (a.a.)METAL
293 (a.a.)METAL
297 (a.a.)METAL
507 (a.a.)METAL
References Uniprot:Q51739 Pubmed:7642512,1907273,7878465

close this sectionComputational search results

BLASTP
Database:UniProtKB:15.0
1E=0Q0W0W8_UNCMAPutative tungsten-containing aldehyde:ferredoxin oxidoreductaseAlignment
2E=1e-135Q0PIE0_HELMOAldehyde:ferredoxin oxidoreductaseAlignment
3E=1e-133Q74EQ2_GEOSLAldehyde:ferredoxin oxidoreductase, tungsten-containingAlignment
4E=1e-131B0TA33_HELMITungsten-containing aldehyde ferredoxin oxidoreductaseAlignment
5E=1e-131Q3ADZ1_CARHZAldehyde ferredoxin oxidoreductase, tungsten-containingAlignment
HAMAP No significant hit
InterPro
Database:interpro:18.0
IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal (Domain)
 [223-615]  1.1e-92 PF01314
PF01314   AFOR_C
 [213-619]  3.2e-116 SSF48310
SSF48310   Aldehyde ferredoxin oxidoreductase, C-terminal domains
IPR001203 Aldehyde ferredoxin oxidoreductase (Family)
 [223-615]  1.1e-92 PF01314
PF01314   AFOR_C
 [6-209]  1.8e-104 PF02730
PF02730   AFOR_N
IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal (Domain)
 [3-214]  7.8e-78 SSF56228
SSF56228   Aldehyde ferredoxin oxidoreductase, N-terminal domain
 [3-213]  1.5e-69 G3DSA:3.60.9.10
G3DSA:3.60.9.10   no description
 [6-209]  1.8e-104 PF02730
PF02730   AFOR_N
 [6-209]  4.9e-106 SM00790
SM00790   no description
IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 (Domain)
 [405-619]  2.1e-55 G3DSA:1.10.599.10
G3DSA:1.10.599.10   no description
SignalP No significant hit
TMHMM No significant hit
SOSUI 
 [498-520]  Transmembrane
Transmembrane 1   

close this sectionCalculated information (Amino acid sequence)

size of protein 634 amino acids
molecular mass 69,439.80 Da
pI 5.57
aa composition
AlaValLeuIlePheTrpProMetGlySer
9.1
(58aa)		5.4
(34aa)		8.8
(56aa)		4.4
(28aa)		3.5
(22aa)		1.3
(8aa)		4.6
(29aa)		3.2
(20aa)		10.9
(69aa)		4.3
(27aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.6
(42aa)		1.9
(12aa)		3.6
(23aa)		2.5
(16aa)		4.3
(27aa)		5.7
(36aa)		1.7
(11aa)		5.4
(34aa)		6.9
(44aa)		6
(38aa)

open this sectionSequence

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.