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CDS Information : MCP_2904

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close this sectionGenomic map

Display Clone

Methanocella paludicola SANAET (= NBRC 101707T) chromosome

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Overview 
Genome
Clone

close this sectionLocation

Organism Methanocella paludicola SANAET (= NBRC 101707T)
Replicon chromosome
Start / Stop / Direction 2,856,310 / 2,855,120 / -
Location complement(2855120..2856310)
Type CDS
Length 1,191 bp (396 aa)

close this sectionAnnotation

Product formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase
Synonym: fae/hps bifunctional enzyme
Synonym: D-arabino-3-hexulose-6-phosphate formaldehyde lyase
Gene name fae/hps
Functional category Metabolism
- Carbohydrate Metabolism
EC number 4.3.-.-
4.1.2.-
Note bifunctional protein
KEGG pathway map:00350 KO:K01636
Sequence feature

17 (a.a.)ACT_SITE
19 (a.a.)BINDING
48 (a.a.)BINDING
66 (a.a.)BINDING
68 (a.a.)BINDING
83 (a.a.)BINDING


References HAMAP:MF_01268

close this sectionComputational search results

BLASTP
Database:UniProtKB:15.0
1E=0FAEHP_UNCMABifunctional enzyme fae/hps
Formaldehyde-activating enzyme
3-hexulose-6-phosphate synthase
D-arabino-3-hexulose-6-phosphate formaldehyde lyase
Alignment
2E=1e-151FAEHP_METMABifunctional enzyme fae/hps
Formaldehyde-activating enzyme
3-hexulose-6-phosphate synthase
D-arabino-3-hexulose-6-phosphate formaldehyde lyase
Alignment
3E=1e-151FAEHP_METACBifunctional enzyme fae/hps
Formaldehyde-activating enzyme
3-hexulose-6-phosphate synthase
D-arabino-3-hexulose-6-phosphate formaldehyde lyase
Alignment
4E=1e-149FAEHP_METB6Bifunctional enzyme fae/hps
Formaldehyde-activating enzyme
3-hexulose-6-phosphate synthase
D-arabino-3-hexulose-6-phosphate formaldehyde lyase
Alignment
5E=1e-149FAEHP_METBFBifunctional enzyme fae/hps
Formaldehyde-activating enzyme
3-hexulose-6-phosphate synthase
D-arabino-3-hexulose-6-phosphate formaldehyde lyase
Alignment
HAMAP
Database:HAMAP:20061004
 [1-396]  57.688 MF_01268
MF_01268   FAEHP
InterPro
Database:interpro:18.0
IPR000056 Ribulose-phosphate 3-epimerase (Family)
 [332-392]  9.8e-05 PTHR11749
PTHR11749   RIBULOSE-5-PHOSPHATE-3-EPIMERASE
IPR001754 Orotidine 5'-phosphate decarboxylase (Domain)
 [173-378]  9.2e-35 PF00215
PF00215   OMPdecase
IPR011060 Ribulose-phosphate binding barrel (Domain)
 [172-384]  5.4e-37 SSF51366
SSF51366   Ribulose-phoshate binding barrel
IPR013785 Aldolase-type TIM barrel (Domain)
 [170-382]  1.2e-54 G3DSA:3.20.20.70
G3DSA:3.20.20.70   no description
IPR014826 Formaldehyde-activating enzyme (Domain)
 [2-165]  3.1e-64 G3DSA:3.30.230.60
G3DSA:3.30.230.60   no description
 [4-163]  1.8e-104 PF08714
PF08714   Fae
 [2-161]  1.7e-116 TIGR03126
TIGR03126   one_C_fae: formaldehyde-activating enzyme
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 396 amino acids
molecular mass 42,679.82 Da
pI 6.8
aa composition
AlaValLeuIlePheTrpProMetGlySer
13.6
(54aa)
10.1
(40aa)
7.3
(29aa)
9.1
(36aa)
2.3
(9aa)
0.5
(2aa)
4.8
(19aa)
3.3
(13aa)
7.8
(31aa)
1.8
(7aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.3
(17aa)
0.5
(2aa)
3.3
(13aa)
2
(8aa)
2.5
(10aa)
7.8
(31aa)
2.3
(9aa)
4
(16aa)
6.3
(25aa)
6.3
(25aa)

open this sectionSequence

close this sectionDistribution of Our Microbial Genomic DNA clones

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.