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CDS Information : MLP_00110

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Microlunatus phosphovorus NM-1T (= NBRC 101784T) chromosome

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Overview 
Genome

close this sectionLocation

Organism Microlunatus phosphovorus NM-1T (= NBRC 101784T)
Replicon chromosome
Start / Stop / Direction 13,117 / 11,978 / -
Location complement(11978..13117)
Type CDS
Length 1,140 bp (379 aa)

close this sectionAnnotation

Product DNA replication and repair protein RecF
Gene name recF
Functional category Genetic Information Processing
- Replication and Repair
EC number
Note
KEGG pathway map:03440 KO:K03629
Sequence feature
References HAMAP:MF_00365

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-125D1YCU9_PROACDNA replication and repair protein recFAlignment
2E=1e-125RECF_PROACDNA replication and repair protein recFAlignment
3E=1e-120D1WU08_9ACTODNA replication and repair protein recFAlignment
4E=1e-120RECF_STRGGDNA replication and repair protein recFAlignment
5E=1e-119C9N4K6_9ACTODNA replication and repair protein recFAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR001238 DNA-binding, RecF (Family)
 [120-140]  PS00617
PS00617   RECF_1
 [1-375]  4.7e-135 TIGR00611
TIGR00611   recf: DNA replication and repair protein Rec
 [321-339]  PS00618
PS00618   RECF_2
 [1-375]  27.964 MF_00365
MF_00365   RECF_MF_00365
IPR003395 SMC protein, N-terminal (Domain)
 [3-353]  2.3e-17 PF02463
PF02463   SMC_N
IPR018078 DNA-binding, RecF, conserved site (Conserved_site)
 [120-140]  PS00617
PS00617   RECF_1
 [321-339]  PS00618
PS00618   RECF_2
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 379 amino acids
molecular mass 41,346.13 Da
pI 6.74
aa composition
AlaValLeuIlePheTrpProMetGlySer
11.9
(45aa)
10.8
(41aa)
13.2
(50aa)
1.3
(5aa)
2.4
(9aa)
0.8
(3aa)
5
(19aa)
1.6
(6aa)
7.1
(27aa)
6.9
(26aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.7
(18aa)
0.3
(1aa)
1.3
(5aa)
2.6
(10aa)
1.8
(7aa)
2.1
(8aa)
2.1
(8aa)
10.6
(40aa)
6.6
(25aa)
6.9
(26aa)

open this sectionSequence