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CDS Information : MW0015

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Staphylococcus aureus MW2 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus aureus MW2
Replicon chromosome
Start / Stop / Direction 20,286 / 20,732 / +
Location 20286..20732
Type CDS
Length 447 bp (148 aa)

close this sectionAnnotation

Product 50S ribosomal protein L9
Gene name rplI
Functional category Information pathways
- Protein synthesis
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[14] SE0014 1e-55(207)
50S ribosomal protein L9(rplI)
[2477] SERP2538 1e-55(207)
50S ribosomal protein L9(rplI)

close this sectionRelated links to external database

UniProtP66319
INSDBAB93880.1 (DDBJ GenBank EMBL)
RefSeqNP_644830.1
GI21281744
GeneID1004393
UniParcUPI0000134207

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=7e-79D1GU27_STAA050S ribosomal protein L9Alignment
2E=7e-79D0K736_STAAD50S ribosomal protein L9Alignment
3E=7e-79D3ER56_STAAU50S ribosomal protein L9Alignment
4E=7e-79D2UVU5_STAAURibosomal protein L9Alignment
5E=7e-79D2UIJ3_STAAU50S ribosomal protein L9Alignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000244 Ribosomal protein L9 (Family)
 [1-148]  1e-44 TIGR00158
TIGR00158   L9: ribosomal protein L9
 [1-48]  2.6e-21 PF01281
PF01281   Ribosomal_L9_N
 [63-147]  2.3e-28 PF03948
PF03948   Ribosomal_L9_C
 [56-148]  1.3e-27 SSF55653
SSF55653   Ribosomal protein L9 C-domain
 [1-59]  7.2e-16 G3DSA:3.40.5.10
G3DSA:3.40.5.10   no description
 [13-40]  PS00651
PS00651   RIBOSOMAL_L9
 [60-145]  3e-22 G3DSA:3.10.430.100
G3DSA:3.10.430.100   no description
IPR009027 Ribosomal protein L9 N-terminal-like (Domain)
 [1-55]  5.7e-17 SSF55658
SSF55658   L9 N-domain-like
IPR020069 Ribosomal protein L9, C-terminal (Domain)
 [60-145]  3e-22 G3DSA:3.10.430.100
G3DSA:3.10.430.100   no description
 [63-147]  2.3e-28 PF03948
PF03948   Ribosomal_L9_C
 [56-148]  1.3e-27 SSF55653
SSF55653   Ribosomal protein L9 C-domain
IPR020070 Ribosomal protein L9, N-terminal (Domain)
 [13-40]  PS00651
PS00651   RIBOSOMAL_L9
 [1-48]  2.6e-21 PF01281
PF01281   Ribosomal_L9_N
 [1-59]  7.2e-16 G3DSA:3.40.5.10
G3DSA:3.40.5.10   no description
IPR020594 Ribosomal protein L9, bacteria/chloroplast (Family)
 [1-148]  24.35 MF_00503
MF_00503   RL9_MF_00503
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 148 amino acids
molecular mass 16,453.96 Da
pI 10.07
aa composition
AlaValLeuIlePheTrpProMetGlySer
6.8
(10aa)		9.5
(14aa)		8.1
(12aa)		5.4
(8aa)		2
(3aa)		0
(0aa)		2.7
(4aa)		1.4
(2aa)		8.1
(12aa)		3.4
(5aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.4
(8aa)		0
(0aa)		4.7
(7aa)		6.1
(9aa)		2
(3aa)		15.5
(23aa)		2
(3aa)		2.7
(4aa)		4.1
(6aa)		10.1
(15aa)

open this sectionSequence