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CDS Information : MW0019

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close this sectionGenomic map

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Staphylococcus aureus MW2 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus aureus MW2
Replicon chromosome
Start / Stop / Direction 25,644 / 27,470 / +
Location 25644..27470
Type CDS
Length 1,827 bp (608 aa)

close this sectionAnnotation

Product two-component sensor histidine kinase
Gene name vicK
Functional category Cell envelope and cellular processes
- Sensors (signal transduction)
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[19] SE0019 0(1091)
two-component sensor histidine kinase
[2472] SERP2533 0(1091)
sensory box histidine kinase YycG(yycG)

close this sectionRelated links to external database

UniProtQ7A215
INSDBAB93884.1 (DDBJ GenBank EMBL)
RefSeqNP_644834.1
GI21281748
GeneID1004770
UniParcUPI000005499E

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0D0K740_STAADSensor proteinAlignment
2E=0D3ER60_STAAUTwo-component sensor kinaseAlignment
3E=0D2UIJ7_STAAUSensor protein kinase walKAlignment
4E=0D2N361_STAAUSensor protein YycGAlignment
5E=0D2GMM5_STAAUSensor proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000014 PAS (Domain)
 [261-322]  13.29 PS50112
PS50112   PAS
 [263-329]  1.2e-08 SM00091
SM00091   no description
 [259-376]  1.3e-11 TIGR00229
TIGR00229   sensory_box: PAS domain S-box
IPR000700 PAS-associated, C-terminal (Domain)
 [314-378]  9.737 PS50113
PS50113   PAC
IPR003594 ATP-binding region, ATPase-like (Domain)
 [448-606]  1.2e-33 G3DSA:3.30.565.10
G3DSA:3.30.565.10   no description
 [431-598]  1.1e-46 SSF55874
SSF55874   ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
 [486-600]  3.7e-38 SM00387
SM00387   no description
 [487-597]  1.1e-29 PF02518
PF02518   HATPase_c
IPR003660 Histidine kinase, HAMP region (Domain)
 [204-256]  1.9e-14 SM00304
SM00304   no description
 [204-256]  11.102 PS50885
PS50885   HAMP
 [185-252]  2e-18 PF00672
PF00672   HAMP
IPR003661 Histidine kinase A, N-terminal (Domain)
 [376-441]  5.2e-20 PF00512
PF00512   HisKA
 [375-442]  2.3e-22 SM00388
SM00388   no description
IPR004358 Histidine kinase related protein, C-terminal (Domain)
 [525-539]  5.9e-18 PR00344 [543-553]  5.9e-18 PR00344 [560-578]  5.9e-18 PR00344 [584-597]  5.9e-18 PR00344
PR00344   BCTRLSENSOR
IPR005467 Histidine kinase (Domain)
 [382-600]  47.186 PS50109
PS50109   HIS_KIN
IPR009082 Histidine kinase, homodimeric (Domain)
 [365-438]  6.3e-20 SSF47384
SSF47384   Homodimeric domain of signal transducing histidine kinase
IPR013767 PAS fold (Domain)
 [264-366]  8.3e-08 PF00989
PF00989   PAS
SignalP No significant hit
TMHMM 
 [15-37]  Transmembrane (o-i) [183-205]  Transmembrane (i-o)
Transmembrane 2   
SOSUI 
 [10-32]  Transmembrane [183-205]  Transmembrane
Transmembrane 2   

close this sectionCalculated information (Amino acid sequence)

size of protein 608 amino acids
molecular mass 69,923.98 Da
pI 5.4
aa composition
AlaValLeuIlePheTrpProMetGlySer
4.4
(27aa)		6.4
(39aa)		8.2
(50aa)		11.3
(69aa)		3.8
(23aa)		0.8
(5aa)		1.5
(9aa)		3
(18aa)		5.4
(33aa)		5.3
(32aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.6
(34aa)		0.2
(1aa)		7.4
(45aa)		4.9
(30aa)		3
(18aa)		7.2
(44aa)		1.3
(8aa)		5.6
(34aa)		6.6
(40aa)		8.1
(49aa)

open this sectionSequence