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CDS Information : MW0086

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Staphylococcus aureus MW2 chromosome

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Overview 
Genome

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Organism Staphylococcus aureus MW2
Replicon chromosome
Start / Stop / Direction 103,466 / 102,549 / -
Location complement(102549..103466)
Type CDS
Length 918 bp (305 aa)

close this sectionAnnotation

Product iron-regulated ABC transporter siderophore permease protein SirC
Gene name sirC
Functional category Cell envelope and cellular processes
- Transport / binding proteins and lipoproteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A

close this sectionRelated links to external database

UniProtQ8NYS9
INSDBAB93951.1 (DDBJ GenBank EMBL)
RefSeqNP_644901.1
GI21281815
GeneID1004836
UniParcUPI00000D9BA9

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-166Q6GD12_STAASPutative siderophore transport system permeaseAlignment
2E=1e-166C5QEJ3_STAAUIron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane proteinAlignment
3E=1e-166Q8NYS9_STAAWIron-regulated ABC transporter siderophore permease protein SirCAlignment
4E=1e-165Q5HJQ6_STAACIron compound ABC transporter, permease protein SirCAlignment
5E=1e-165Q2FKE6_STAA3Iron compound ABC transporter, permease protein SirCAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000522 Bacterial transport system permease protein (Family)
 [2-300]  1.69999999999998e-82 PF01032
PF01032   FecCD
SignalP No significant hit
TMHMM 
 [32-54]  Transmembrane (o-i) [67-84]  Transmembrane (i-o) [88-110]  Transmembrane (o-i) [122-144]  Transmembrane (i-o) [164-186]  Transmembrane (o-i) [217-239]  Transmembrane (i-o) [254-276]  Transmembrane (o-i) [283-302]  Transmembrane (i-o)
Transmembrane 8   
SOSUI 
 [30-52]  Transmembrane [77-99]  Transmembrane [123-144]  Transmembrane [159-181]  Transmembrane [215-237]  Transmembrane [254-276]  Transmembrane [281-302]  Transmembrane
Transmembrane 7   

close this sectionCalculated information (Amino acid sequence)

size of protein 305 amino acids
molecular mass 32,627.98 Da
pI 10.77
aa composition
AlaValLeuIlePheTrpProMetGlySer
9.5
(29aa)		7.5
(23aa)		16.1
(49aa)		13.4
(41aa)		5.6
(17aa)		0.3
(1aa)		4.6
(14aa)		4.9
(15aa)		8.2
(25aa)		6.2
(19aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.9
(18aa)		0
(0aa)		1.6
(5aa)		3.3
(10aa)		1.6
(5aa)		4.6
(14aa)		1.3
(4aa)		2.3
(7aa)		2.3
(7aa)		0.7
(2aa)

open this sectionSequence