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CDS Information : MW0087

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Staphylococcus aureus MW2 chromosome

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Overview 
Genome

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Organism Staphylococcus aureus MW2
Replicon chromosome
Start / Stop / Direction 104,539 / 103,544 / -
Location complement(103544..104539)
Type CDS
Length 996 bp (331 aa)

close this sectionAnnotation

Product iron-regulated ABC transporter siderophore permease protein SirB
Gene name sirB
Functional category Cell envelope and cellular processes
- Transport / binding proteins and lipoproteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A

close this sectionRelated links to external database

UniProtQ8NYS8
INSDBAB93952.1 (DDBJ GenBank EMBL)
RefSeqNP_644902.1
GI21281816
GeneID1004839
UniParcUPI00000D9BAA

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q8NYS8_STAAWIron-regulated ABC transporter siderophore permease protein SirBAlignment
2E=0Q6GD11_STAASPutative siderophore transport system permeaseAlignment
3E=0C5QEJ2_STAAUIron compound ABC superfamily ATP binding cassette transporter, permease protein SirBAlignment
4E=1e-180Q2G1N5_STAA8Lipoprotein, SirB, putativeAlignment
5E=1e-180Q2FKE5_STAA3Iron compound ABC transporter, permease protein SirBAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000522 Bacterial transport system permease protein (Family)
 [16-325]  9.4e-89 PF01032
PF01032   FecCD
SignalP 
 [1-39]  0.985 Signal
Bacteria, Gram-positive   
TMHMM 
 [9-31]  Transmembrane (i-o) [58-77]  Transmembrane (o-i) [90-112]  Transmembrane (i-o) [116-135]  Transmembrane (o-i) [148-170]  Transmembrane (i-o) [195-217]  Transmembrane (o-i) [241-263]  Transmembrane (i-o) [278-300]  Transmembrane (o-i) [307-324]  Transmembrane (i-o)
Transmembrane 9   
SOSUI 
 [12-34]  Transmembrane [59-81]  Transmembrane [86-108]  Transmembrane [113-135]  Transmembrane [139-161]  Transmembrane [200-222]  Transmembrane [240-262]  Transmembrane [278-300]  Transmembrane [303-324]  Transmembrane
Transmembrane 9   

close this sectionCalculated information (Amino acid sequence)

size of protein 331 amino acids
molecular mass 35,521.45 Da
pI 10.6
aa composition
AlaValLeuIlePheTrpProMetGlySer
10.9
(36aa)		9.1
(30aa)		14.2
(47aa)		16
(53aa)		5.1
(17aa)		1.2
(4aa)		3.9
(13aa)		4.2
(14aa)		7.3
(24aa)		5.4
(18aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.5
(15aa)		0.3
(1aa)		3.3
(11aa)		3
(10aa)		1.2
(4aa)		3
(10aa)		0.9
(3aa)		3
(10aa)		2.4
(8aa)		0.9
(3aa)

open this sectionSequence