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CDS Information : MW0090

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close this sectionGenomic map

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Staphylococcus aureus MW2 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus aureus MW2
Replicon chromosome
Start / Stop / Direction 106,755 / 107,765 / +
Location 106755..107765
Type CDS
Length 1,011 bp (336 aa)

close this sectionAnnotation

Product putative ornithine cyclodeaminase
Gene name sbnB
Functional category Intermediary metabolism
- Metabolism of amino acids and related molecules
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[315] SE0315 4e-30(124)
ornithine cyclodeaminase (EC:4.3.1.12)
[187] SERP0192 4e-30(124)
ornithine cyclodeaminase (EC:4.3.1.12)

close this sectionRelated links to external database

UniProtQ8NYS7
INSDBAB93955.1 (DDBJ GenBank EMBL)
RefSeqNP_644905.1
GI21281819
GeneID1004844
UniParcUPI00000522AC

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q8NYS7_STAAWPutative ornithine cyclodeaminaseAlignment
2E=0Q6GD08_STAASPutative ornithine cyclodeaminaseAlignment
3E=0Q2G1N2_STAA8Ornithine cyclodeaminase, putativeAlignment
4E=0Q2FKE2_STAA3Ornithine cyclodeaminaseAlignment
5E=0A8YZ42_STAATPossible ornithine cyclodeaminaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR003462 Ornithine cyclodeaminase/mu-crystallin (Family)
 [23-327]  2.8e-60 PF02423
PF02423   OCD_Mu_crystall
IPR007110 Immunoglobulin-like (Domain)
 [190-229]  6.978 PS50835
PS50835   IG_LIKE
IPR016040 NAD(P)-binding domain (Domain)
 [136-308]  1.5e-28 G3DSA:3.40.50.720
G3DSA:3.40.50.720   no description
 [5-336]  2.5e-76 SSF51735
SSF51735   NAD(P)-binding Rossmann-fold domains
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 336 amino acids
molecular mass 37,748.77 Da
pI 4.91
aa composition
AlaValLeuIlePheTrpProMetGlySer
8.3
(28aa)		6.3
(21aa)		6.8
(23aa)		9.8
(33aa)		3.3
(11aa)		1.2
(4aa)		3.3
(11aa)		3
(10aa)		6
(20aa)		6
(20aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
3.9
(13aa)		1.2
(4aa)		5.4
(18aa)		6.3
(21aa)		3
(10aa)		5.4
(18aa)		3.3
(11aa)		3.9
(13aa)		6.8
(23aa)		7.1
(24aa)

open this sectionSequence