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CDS Information : MW0092

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Staphylococcus aureus MW2 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus aureus MW2
Replicon chromosome
Start / Stop / Direction 109,533 / 110,789 / +
Location 109533..110789
Type CDS
Length 1,257 bp (418 aa)

close this sectionAnnotation

Product hypothetical efflux protein
Gene name sbnD
Functional category Cell envelope and cellular processes
- Transport / binding proteins and lipoproteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A

close this sectionRelated links to external database

UniProtQ7A1Z5
INSDBAB93957.1 (DDBJ GenBank EMBL)
RefSeqNP_644907.1
GI21281821
GeneID1004847
UniParcUPI00000522E6

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q99X96_STAAMPutative uncharacterized proteinAlignment
2E=0Q7A866_STAANHypothetical efflux proteinAlignment
3E=0Q7A1Z5_STAAWHypothetical efflux proteinAlignment
4E=0Q6GD06_STAASPutative transport proteinAlignment
5E=0Q5HJQ0_STAACDrug transporter, putativeAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR001958 Tetracycline resistance protein (Family)
 [20-36]  6.7e-09 PR01035 [109-130]  6.7e-09 PR01035 [139-161]  6.7e-09 PR01035 [342-365]  6.7e-09 PR01035
PR01035   TCRTETA
IPR007114 Major facilitator superfamily (Family)
 [10-400]  23.819 PS50850
PS50850   MFS
IPR011701 Major facilitator superfamily MFS_1 (Domain)
 [14-243]  7.1e-32 PF07690
PF07690   MFS_1
IPR011701 Major facilitator superfamily MFS_1 (Family)
 [14-243]  7.1e-32 PF07690
PF07690   MFS_1
IPR016196 MFS general substrate transporter (Domain)
 [1-395]  4.8e-57 SSF103473
SSF103473   MFS general substrate transporter
SignalP No significant hit
TMHMM 
 [13-35]  Transmembrane (i-o) [50-72]  Transmembrane (o-i) [85-107]  Transmembrane (i-o) [164-186]  Transmembrane (o-i) [222-244]  Transmembrane (i-o) [259-276]  Transmembrane (o-i) [288-307]  Transmembrane (i-o) [317-339]  Transmembrane (o-i) [346-368]  Transmembrane (i-o) [378-397]  Transmembrane (o-i)
Transmembrane 10   
SOSUI 
 [11-33]  Transmembrane [45-67]  Transmembrane [80-102]  Transmembrane [104-126]  Transmembrane [145-167]  Transmembrane [171-192]  Transmembrane [224-246]  Transmembrane [256-277]  Transmembrane [291-313]  Transmembrane [317-339]  Transmembrane [351-371]  Transmembrane [376-398]  Transmembrane
Transmembrane 12   

close this sectionCalculated information (Amino acid sequence)

size of protein 418 amino acids
molecular mass 44,835.32 Da
pI 9.83
aa composition
AlaValLeuIlePheTrpProMetGlySer
10.3
(43aa)		8.1
(34aa)		12.9
(54aa)		9.3
(39aa)		5.3
(22aa)		1.9
(8aa)		2.9
(12aa)		3.3
(14aa)		7.2
(30aa)		9.6
(40aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.9
(29aa)		2.4
(10aa)		3.1
(13aa)		4.8
(20aa)		1.4
(6aa)		3.3
(14aa)		1
(4aa)		3.1
(13aa)		1.7
(7aa)		1.4
(6aa)

open this sectionSequence