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CDS Information : MW0503

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close this sectionGenomic map

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Staphylococcus aureus MW2 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus aureus MW2
Replicon chromosome
Start / Stop / Direction 581,352 / 582,536 / +
Location 581352..582536
Type CDS
Length 1,185 bp (394 aa)

close this sectionAnnotation

Product translational elongation factor TU
Gene name tufA
Functional category Information pathways
- Protein synthesis
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[312] SE0312 0(704)
elongation factor Tu (EC:3.6.5.3)(tuf)
[184] SERP0189 0(704)
elongation factor Tu (EC:3.6.5.3)(tuf)

close this sectionRelated links to external database

UniProtP64029
INSDBAB94368.1 (DDBJ GenBank EMBL)
RefSeqNP_645320.1
GI21282232
GeneID1002614
UniParcUPI0000054837

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0D1GPE9_STAA0Elongation factor TuAlignment
2E=0D0K9K0_STAADElongation factor TuAlignment
3E=0D3ETT0_STAAUTranslation elongation factor TuAlignment
4E=0D2UPQ4_STAAUTranslation elongation factor TuAlignment
5E=0D2UJV5_STAAUElongation factor TuAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000795 Protein synthesis factor, GTP-binding (Domain)
 [10-202]  6.8e-64 PF00009
PF00009   GTP_EFTU
 [14-27]  1.2e-24 PR00315 [58-66]  1.2e-24 PR00315 [78-88]  1.2e-24 PR00315 [94-105]  1.2e-24 PR00315 [131-140]  1.2e-24 PR00315
PR00315   ELONGATNFCT
 [51-66]  PS00301
PS00301   EFACTOR_GTP
IPR004160 Translation elongation factor EFTu/EF1A, C-terminal (Domain)
 [298-393]  1.6e-39 PF03143
PF03143   GTP_EFTU_D3
IPR004161 Translation elongation factor EFTu/EF1A, domain 2 (Domain)
 [225-294]  1.3e-18 PF03144
PF03144   GTP_EFTU_D2
IPR004541 Translation elongation factor Tu (Family)
 [1-394]  1.1e-279 TIGR00485
TIGR00485   EF-Tu: translation elongation factor Tu
IPR005225 Small GTP-binding protein domain (Domain)
 [10-185]  5.8e-09 TIGR00231
TIGR00231   small_GTP: small GTP-binding protein domain
IPR009000 Translation elongation and initiation factors/Ribosomal, beta-barrel (Domain)
 [203-302]  2.2e-36 SSF50447
SSF50447   Translation proteins
IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (Domain)
 [302-394]  5.1e-39 SSF50465
SSF50465   EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 394 amino acids
molecular mass 43,103.64 Da
pI 4.48
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.6
(30aa)
10.2
(40aa)
6.3
(25aa)
6.3
(25aa)
3
(12aa)
0
(0aa)
4.6
(18aa)
3.6
(14aa)
9.1
(36aa)
4.1
(16aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
7.6
(30aa)
0.3
(1aa)
2.5
(10aa)
2.3
(9aa)
2.8
(11aa)
4.6
(18aa)
3
(12aa)
5.1
(20aa)
7.6
(30aa)
9.4
(37aa)

open this sectionSequence