CDS Information : NIES39_A00300
open/close allGenomic map
| Information storage and processing |
| [J] Translation, ribosomal structure and biogenesis |
| [A] RNA processing and modification |
| [K] Transcription |
| [L] Replication, recombination and repair |
| Cellular processes and signaling |
| [D] Cell cycle control, cell division, chromosome partitioning |
| [V] Defense mechanisms |
| [T] Signal transduction mechanisms |
| [M] Cell wall/membrane/envelope biogenesis |
| [N] Cell motility |
| [U] Intracellular trafficking, secretion, and vesicular transport |
| [O] Posttranslational modification, protein turnover, chaperones |
| Metabolism |
| [C] Energy production and conversion |
| [G] Carbohydrate transport and metabolism |
| [E] Amino acid transport and metabolism |
| [F] Nucleotide transport and metabolism |
| [H] Coenzyme transport and metabolism |
| [I] Lipid transport and metabolism |
| [P] Inorganic ion transport and metabolism |
| [Q] Secondary metabolites biosynthesis, transport and catabolism |
| Poorly characterized |
| [R] General function prediction only |
| [S] Function unknown |
| Unannotated |
Location
| Organism |
Arthrospira platensis NIES-39 |
| Replicon |
Chromosome |
| Start / Stop / Direction |
21,581 / 20,457 / - |
| Location |
complement(20457..21581) |
| Type |
CDS |
| Length |
1,125 bp (374 aa) |
Annotation
| Product |
phosphonopyruvate decarboxylase |
| Gene name |
|
| Functional category |
Poorly characterized
- [R] General function prediction only |
| EC number |
|
| Note |
|
| KEGG pathway |
|
| Sequence feature |
|
| References |
|
Computational search results
BLASTP
Database:UniProtKB:15.0
|
|
| HAMAP |
No significant hit |
| InterPro |
No significant hit |
| SignalP |
No significant hit |
| TMHMM |
No significant hit |
| SOSUI |
No significant hit |
Calculated information (Amino acid sequence)
| size of protein |
374 amino acids |
| molecular mass |
40,046.64 Da |
| pI |
6.86 |
| aa composition |
| Ala | Val | Leu | Ile | Phe | Trp | Pro | Met | Gly | Ser |
|---|
9.6
(36aa) | 7
(26aa) | 11
(41aa) | 6.4
(24aa) | 2.7
(10aa) | 0.8
(3aa) | 5.9
(22aa) | 1.3
(5aa) | 9.9
(37aa) | 6.1
(23aa) |
| Thr | Cys | Asn | Gln | Tyr | Lys | His | Arg | Asp | Glu |
|---|
5.9
(22aa) | 0.5
(2aa) | 3.5
(13aa) | 7.5
(28aa) | 2.9
(11aa) | 4.3
(16aa) | 2.7
(10aa) | 3.5
(13aa) | 5.3
(20aa) | 3.2
(12aa) |
|
Sequence
>NIES39_A00300 phosphonopyruvate decarboxylase
ATGATAGACCCCCAAGCCTTTTATACAACTCTATACCAAGCCGGCGTGCATTTATTTGCC
GGTGTTCCCGATTCCCTACTCAAAGACTTCTGTGCCTATATAGACGACCATAGCCAGCCC
GGGGAACATATTATCACCGCCAATGAAGGGAATGCGATCGCCCTAGTGGCTGGCTATCAC
CTAGCCACCCGGCAAATCGGGGCAGTATATTTGCAAAATTCAGGATTAGGGAACACCATT
AACCCTCTCACCTCACTTACCGACCCTCAGGTGTACAAAATCCCCTTGGTGATGATAATT
GGTTGGCGTGGGGAACCAGGGGTAAAAGACGAGCCACAACACATTAAACAAGGGGCCATT
ACCCCAGGGCAACTGGATCTCTTGGGGGTTCCCTATTGGATAGTAGATGGCCACAGTGAT
TTTCAGCAAATTATCCAAGAGGCTCTAACCAAAATCCAAGCTACCAACGCCCCAGTAGCT
CTGTTGGTAAGGAAAGGCACATTTTTCCCCTATCAAAAAAGCCAGCGGCCACCGTCTTTT
AAAGCTTCCCTCAAGCGAGAAGCTGCCCTGGGTGAGCTTTTAACCCTAGTGGGGGATAGT
TTAGTAGTATCTACAACGGGCAAAACCTCCCGAGAACTGTTTGAGCTACGCCAACAACGA
GGTGAAGCTCAACGGGATTTTCTGACTGTTGGCAGTATGGGACATACAGCTTCCATTGCT
TTAGGTGTAGCTTTGGGAAACCCCAGCAAATCGGTGGTCTGTATCGATGGGGATGGCTCC
TTACTTATGCACTTAGGCGCAGTACCGATTATTGGTAGTTTAGCACCAAAAAACCTGATT
CATGTTGTTTTAAATAATGCCGCCCATGAGTCGGTTGGCGGCCAGCCCACAGTCGCCGGA
CAGCTAGACTTGAAAGCTGTAGCCCTAGCCAGTGGCTATCAACAATACCGACAGGCTACG
GATCAACCTGGCATTAAACAAGCCTGGAACGATTTATCTGCCTACGATGGTCCAGTATTA
CTGGAAATTCGCATTACAGCCGGTTCCCGCGACAATTTGGGACGACCCACTAGCAGTCCA
CAGCAAAATAAACAAGCATTTATGAAAGTGGCAACCGATGGCTAA
>NIES39_A00300 phosphonopyruvate decarboxylase
MIDPQAFYTTLYQAGVHLFAGVPDSLLKDFCAYIDDHSQPGEHIITANEGNAIALVAGYH
LATRQIGAVYLQNSGLGNTINPLTSLTDPQVYKIPLVMIIGWRGEPGVKDEPQHIKQGAI
TPGQLDLLGVPYWIVDGHSDFQQIIQEALTKIQATNAPVALLVRKGTFFPYQKSQRPPSF
KASLKREAALGELLTLVGDSLVVSTTGKTSRELFELRQQRGEAQRDFLTVGSMGHTASIA
LGVALGNPSKSVVCIDGDGSLLMHLGAVPIIGSLAPKNLIHVVLNNAAHESVGGQPTVAG
QLDLKAVALASGYQQYRQATDQPGIKQAWNDLSAYDGPVLLEIRITAGSRDNLGRPTSSP
QQNKQAFMKVATDG
