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CDS Information : OBV_00150

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close this sectionGenomic map

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Oscillibacter valericigenes Sjm18-20T (= NBRC 101213T) chromosome

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Overview 
Genome

close this sectionLocation

Organism Oscillibacter valericigenes Sjm18-20T (= NBRC 101213T)
Replicon chromosome
Start / Stop / Direction 16,074 / 18,035 / +
Location 16074..18035
Type CDS
Length 1,962 bp (653 aa)

close this sectionAnnotation

Product methionyl-tRNA synthetase
Synonym: methionine--tRNA ligase
Gene name metG
Functional category Genetic Information Processing
- Translation
EC number 6.1.1.10
Note
KEGG pathway KO:K01874
map:00970 KO:K01874
Sequence feature
References HAMAP:MF_01228 Family/Domain:

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0A6NYG9_9BACEPutative uncharacterized proteinAlignment
2E=0D1PPY9_9FIRMMethionine--tRNA ligaseAlignment
3E=0B0P8F7_9FIRMPutative uncharacterized proteinAlignment
4E=0A7VVD0_9CLOTPutative uncharacterized proteinAlignment
5E=0A3DH74_CLOTHMethionyl-tRNA synthetaseAlignment
HAMAP
Database:HAMAP:20080521 
 [1-509]  48.258 MF_01228
MF_01228   SYM
InterPro
Database:interpro:26.0
IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site (Conserved_site)
 [15-24]  PS00178
PS00178   AA_TRNA_LIGASE_I
IPR001412 Aminoacyl-tRNA synthetase, class I (Domain)
 [15-24]  PS00178
PS00178   AA_TRNA_LIGASE_I
IPR001412 Aminoacyl-tRNA synthetase, class I (Family)
 [15-24]  PS00178
PS00178   AA_TRNA_LIGASE_I
IPR002304 Methionyl-tRNA synthetase, class Ia (Domain)
 [6-511]  1.1e-220 TIGR00398
TIGR00398   metG: methionyl-tRNA synthetase
IPR002547 t-RNA-binding region (Domain)
 [555-650]  1.4e-21 PF01588
PF01588   tRNA_bind
 [548-653]  26.364 PS50886
PS50886   TRBD
IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal (Domain)
 [513-653]  1.4e-36 TIGR00399
TIGR00399   metG_C_term: methionyl-tRNA synthetase, b
IPR008994 Nucleic acid-binding, OB-fold (Domain)
 [544-652]  4.3e-32 SSF50249
SSF50249   Nucleic acid-binding proteins
IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (Domain)
 [351-510]  6.4e-47 SSF47323
SSF47323   Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
IPR012340 Nucleic acid-binding, OB-fold (Domain)
 [547-652]  1.8e-26 G3DSA:2.40.50.140
G3DSA:2.40.50.140   no description
IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (Domain)
 [384-540]  2.6e-09 PF08264
PF08264   Anticodon_1
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold (Domain)
 [2-354]  7.9e-111 G3DSA:3.40.50.620
G3DSA:3.40.50.620   no description
IPR014758 Methionyl-tRNA synthetase, class Ia, N-terminal (Domain)
 [8-21]  4.1e-31 PR01041 [40-54]  4.1e-31 PR01041 [91-102]  4.1e-31 PR01041 [226-237]  4.1e-31 PR01041 [258-273]  4.1e-31 PR01041 [350-361]  4.1e-31 PR01041
PR01041   TRNASYNTHMET
IPR014758 Methionyl-tRNA synthetase (Family)
 [8-21]  4.1e-31 PR01041 [40-54]  4.1e-31 PR01041 [91-102]  4.1e-31 PR01041 [226-237]  4.1e-31 PR01041 [258-273]  4.1e-31 PR01041 [350-361]  4.1e-31 PR01041
PR01041   TRNASYNTHMET
 [6-511]  1.1e-220 TIGR00398
TIGR00398   metG: methionyl-tRNA synthetase
IPR015413 Aminoacyl-tRNA synthetase, class I (M) (Domain)
 [6-362]  2.5e-124 PF09334
PF09334   tRNA-synt_1g
IPR015413 Methionyl/Leucyl tRNA synthetase (Family)
 [6-362]  2.5e-124 PF09334
PF09334   tRNA-synt_1g
IPR023457 Methionyl-tRNA synthetase, type 2 (Family)
 [1-509]  48.258 MF_01228
MF_01228   SYM_MF_01228
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 653 amino acids
molecular mass 74,458.46 Da
pI 5.95
aa composition
AlaValLeuIlePheTrpProMetGlySer
6.7
(44aa)		5.8
(38aa)		9.5
(62aa)		6.1
(40aa)		4.4
(29aa)		1.8
(12aa)		4.4
(29aa)		2.8
(18aa)		6.7
(44aa)		4.3
(28aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.4
(35aa)		2.1
(14aa)		3.2
(21aa)		2.9
(19aa)		4
(26aa)		7.8
(51aa)		2.1
(14aa)		5.1
(33aa)		7.5
(49aa)		7.2
(47aa)

open this sectionSequence