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CDS Information : PH0010

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close this sectionGenomic map

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Pyrococcus horikoshii OT3T (= NBRC 100139T) chromosome

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Overview 
Genome

close this sectionLocation

Organism Pyrococcus horikoshii OT3T (= NBRC 100139T)
Replicon chromosome
Start / Stop / Direction 7,878 / 8,498 / +
Location 7878..8498
Type CDS
Length 621 bp (206 aa)

close this sectionAnnotation

Product conserved hypothetical protein
Gene name
Functional category Unclassified
- Similar to unknown protein
EC number
Note
KEGG pathway
Sequence feature
References HAMAP:MF_00645
DOGAN:PH0010 Pubmed:15558565

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Pyrococcus abyssi GE5Pyrococcus furiosus DSM 3638Thermococcus kodakaraensis KOD1
[13] PAB0006 3e-116(409)
hypothetical protein
[2032] PF1979 8e-115(404)
hypothetical protein
[174] TK0174 8e-108(381)
hypothetical protein

close this sectionRelated links to external database

UniProtO57770
INSDBAA29078.1 (DDBJ GenBank EMBL)
RefSeqNP_142033.1
GI14589972
GeneID1443912
UniParcUPI0000062CCB

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=1e-120Y010_PYRHOProtein PH0010Alignment
2E=1e-113Y010_PYRABProtein PYRAB00100Alignment
3E=1e-111Y1979_PYRFUProtein PF1979Alignment
4E=1e-104Y174_PYRKOProtein TK0174Alignment
5E=1e-56Y488_METKAProtein MK0488Alignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR002733 AMMECR1 (Domain)
 [8-195]  PF01871
PF01871   AMMECR1
 [8-202]  PS51112
PS51112   AMMECR1
 [2-203]  2.6223649489715e-70 TIGR00296
TIGR00296   AMMECR1
 [62-160]  4.60000044330866e-08 PTHR13016
PTHR13016   PTHR13016
 [14-192]  PD009671
PD009671   DUF51
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 206 amino acids
molecular mass 23,623.40 Da
pI 4.49
aa composition
AlaValLeuIlePheTrpProMetGlySer
4.9
(10aa)		8.7
(18aa)		9.2
(19aa)		6.3
(13aa)		3.9
(8aa)		2.9
(6aa)		11.7
(24aa)		1.5
(3aa)		6.3
(13aa)		1.5
(3aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.9
(10aa)		1.5
(3aa)		1.5
(3aa)		1
(2aa)		3.4
(7aa)		7.8
(16aa)		0
(0aa)		5.3
(11aa)		4.9
(10aa)		13.1
(27aa)

open this sectionSequence