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CDS Information : PH0016.1

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close this sectionGenomic map

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Pyrococcus horikoshii OT3T (= NBRC 100139T) chromosome

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Overview 
Genome

close this sectionLocation

Organism Pyrococcus horikoshii OT3T (= NBRC 100139T)
Replicon chromosome
Start / Stop / Direction 15,098 / 13,689 / -
Location complement(13689..15098)
Type CDS
Length 1,410 bp (469 aa)

close this sectionAnnotation

Product phosphoenolpyruvate carboxylase
Gene name pepC
Functional category Metabolism
- Carbohydrate Metabolism
EC number 4.1.1.31
Note
KEGG pathway
Sequence feature
References Uniprot:Q97WG4 Pubmed:15516590

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Pyrococcus abyssi GE5Pyrococcus furiosus DSM 3638Thermococcus kodakaraensis KOD1
[19] PAB2342 0(732)
phosphoenolpyruvate carboxylase
[2028] PF1975 0(680)
phosphoenolpyruvate carboxylase

close this sectionRelated links to external database

UniProtO57764 : N-term changed (+18)
INSDBAA29084.1 (DDBJ GenBank EMBL) : N-term changed (+18)
RefSeqNP_142039.1 : N-term changed (+18)
GI14589978 : N-term changed (+18)
GeneID1443918 : N-term changed (+18)
UniParcUPI0000062CCE : N-term changed (+18)

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=0CAPPA_PYRHOPhosphoenolpyruvate carboxylase
PEPCase
PEPC		Alignment
2E=0CAPPA_PYRABPhosphoenolpyruvate carboxylase
PEPCase
PEPC		Alignment
3E=0CAPPA_PYRFUPhosphoenolpyruvate carboxylase
PEPCase
PEPC		Alignment
4E=1e-122CAPPA_METTHPhosphoenolpyruvate carboxylase
PEPCase
PEPC		Alignment
5E=1e-115CAPPA_METHJPhosphoenolpyruvate carboxylase
PEPCase
PEPC		Alignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR007566 Protein of unknown function DUF557 (Family)
 [1-469]  PF04477
PF04477   DUF557
 [2-469]  TIGR02751
TIGR02751   PEPCase_arch: phosphoenolpyruvate carboxyla
 [1-469]  7.6e-255 PIRSF006677
PIRSF006677   Uncharacterised conserved protein
IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core (Domain)
 [25-469]  6.5e-65 SSF51621
SSF51621   Phosphoenolpyruvate/pyruvate domain
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 469 amino acids
molecular mass 53,953.37 Da
pI 5.69
aa composition
AlaValLeuIlePheTrpProMetGlySer
5.1
(24aa)		7.9
(37aa)		10
(47aa)		7.7
(36aa)		5.5
(26aa)		0.4
(2aa)		6.4
(30aa)		1.9
(9aa)		5.8
(27aa)		5.8
(27aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
3.8
(18aa)		0
(0aa)		2.6
(12aa)		2.6
(12aa)		5.3
(25aa)		7.2
(34aa)		0.9
(4aa)		6.4
(30aa)		4.9
(23aa)		9.8
(46aa)

open this sectionSequence