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CDS Information : PH0026.1

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close this sectionGenomic map

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Pyrococcus horikoshii OT3T (= NBRC 100139T) chromosome

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Overview 
Genome

close this sectionLocation

Organism Pyrococcus horikoshii OT3T (= NBRC 100139T)
Replicon chromosome
Start / Stop / Direction 25,097 / 26,110 / +
Location 25097..26110
Type CDS
Length 1,014 bp (337 aa)

close this sectionAnnotation

Product hypothetical protein
Gene name
Functional category Unclassified
- Similar to unknown protein
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Pyrococcus abyssi GE5Pyrococcus furiosus DSM 3638Thermococcus kodakaraensis KOD1
[31] PAB0017 5e-131(459)
hypothetical protein
[2019] PF1966 3e-108(384)
hypothetical protein
[2297] TK2297 9e-97(345)
hypothetical protein

close this sectionRelated links to external database

UniProtO57754 : N-term changed (-3)
INSDBAA29094.1 (DDBJ GenBank EMBL) : N-term changed (-3)
RefSeqNP_142048.1 : N-term changed (-3)
GI14589987 : N-term changed (-3)
GeneID1443927 : N-term changed (-3)
UniParcUPI0000062CD4 : N-term changed (-3)

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=0O57754_PYRHOPutative uncharacterized protein PH0026Alignment
2E=1e-146Q9V2P7_PYRABPutative uncharacterized proteinAlignment
3E=1e-122Q8TZM4_PYRFUPutative uncharacterized protein PF1966Alignment
4E=1e-109Q5JDC1_PYRKOPutative uncharacterized proteinAlignment
5E=6e-27O57922_PYRHOPutative uncharacterized protein PH0183Alignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR001440 Tetratricopeptide TPR_1 (Repeat)
 [131-164]  0.23 PF00515
PF00515   TPR_1
IPR011990 Tetratricopeptide-like helical (Domain)
 [51-245]  1.7e-15 G3DSA:1.25.40.10
G3DSA:1.25.40.10   no description
IPR013026 Tetratricopeptide region (Domain)
 [52-85]  6.136 PS50005 [91-124]  8.909 PS50005 [131-164]  5.841 PS50005 [171-204]  6.372 PS50005 [208-241]  5.812 PS50005
PS50005   TPR
 [52-85]  62 SM00028 [91-124]  0.021 SM00028 [131-164]  14 SM00028 [171-204]  110 SM00028 [208-241]  120 SM00028
SM00028   no description
 [52-241]  19.299 PS50293
PS50293   TPR_REGION
IPR013026 Tetratricopeptide region (Region)
 [52-241]  19.299 PS50293
PS50293   TPR_REGION
IPR013026 Tetratricopeptide region (Repeat)
 [52-85]  62 SM00028 [91-124]  0.021 SM00028 [131-164]  14 SM00028 [171-204]  110 SM00028 [208-241]  120 SM00028
SM00028   no description
 [52-85]  6.136 PS50005 [91-124]  8.909 PS50005 [131-164]  5.841 PS50005 [171-204]  6.372 PS50005 [208-241]  5.812 PS50005
PS50005   TPR
IPR013105 Tetratricopeptide TPR_2 (Repeat)
 [91-124]  0.0002 PF07719
PF07719   TPR_2
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 337 amino acids
molecular mass 39,756.87 Da
pI 4.29
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.4
(25aa)		3.9
(13aa)		14.2
(48aa)		5.6
(19aa)		4.5
(15aa)		0.9
(3aa)		1.2
(4aa)		1.5
(5aa)		4.5
(15aa)		3
(10aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
1.5
(5aa)		0.6
(2aa)		5.3
(18aa)		0.6
(2aa)		4.7
(16aa)		8.6
(29aa)		1.5
(5aa)		5.6
(19aa)		6.2
(21aa)		18.7
(63aa)

open this sectionSequence