CDS Information : PH0027

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Pyrococcus horikoshii OT3^T (= NBRC 100139^T) chromosome

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Overview
Genome

Center position		change
ID		change
Gene name		change

Genome	Display	Sync
chromosome

Location

Organism	Pyrococcus horikoshii OT3^T (= NBRC 100139^T)
Replicon	chromosome
Start / Stop / Direction	26,670 / 27,503 / +
Location	26670..27503
Type	CDS
Length	834 bp (277 aa)

Annotation

Product	(S)-2,3-Di-O-geranylgeranylglyceryl synthase
Gene name
Functional category	Metabolism - Lipid Metabolism
EC number
Note
KEGG pathway
Sequence feature
References	Uniprot:Q9UWY6 Pubmed:15356000

Comparative genome

Table

Display	BBH1e-1001e-501e-101e-3

Pyrococcus abyssi GE5	Pyrococcus furiosus DSM 3638	Thermococcus kodakaraensis KOD1
[34] PAB0018 1e-118(418) prenyltransferase UbiA-like protein(ubiA)	[2016] PF1963 2e-114(404) prenyltransferase UbiA-like protein(ubiA)	[1957] TK1957 4e-86(310) prenyltransferase UbiA-like protein(ubiA) [1324] TK1324 2e-07(48.9) 4-hydroxybenzoate octaprenyltransferase

UniProt	O57753
INSD	BAA29095.1 (DDBJ GenBank EMBL)
RefSeq	NP_142051.1
GI	14589988
GeneID	1443930
UniParc	UPI0000062CD5

Computational search results

BLASTP
Database:UniProtKB:12.5

show BLAST table

1	E=1e-153	O57753_PYRHO	Putative uncharacterized protein PH0027	Alignment
2	E=1e-123	Q9V2P5_PYRAB	UbiA-like 4-hydroxybenzoate octaprenyltransferase, probable	Alignment
3	E=1e-119	Q8TZM7_PYRFU	4-hydroxybenzoate octaprenyltransferase, putative	Alignment
4	E=5e-89	Q5JDN5_PYRKO	4-hydroxybenzoate octaprenyltransferase	Alignment
5	E=3e-47	Q12VF3_METBU	UbiA prenyltransferase precursor	Alignment

HAMAP

No significant hit

InterPro
Database:interpro:16.0

IPR000537 UbiA prenyltransferase (Family)
	PF01040 UbiA

SignalP

No significant hit

TMHMM

Transmembrane 7

SOSUI

Transmembrane 6

Calculated information (Amino acid sequence)

size of protein

277 amino acids

molecular mass

30,123.22 Da

9.8

aa composition

Ala	Val	Leu	Ile	Phe	Trp	Pro	Met	Gly	Ser
9.7 (27aa)	7.9 (22aa)	11.6 (32aa)	13.7 (38aa)	6.9 (19aa)	0.7 (2aa)	5.1 (14aa)	1.8 (5aa)	9.7 (27aa)	3.6 (10aa)
Thr	Cys	Asn	Gln	Tyr	Lys	His	Arg	Asp	Glu
3.6 (10aa)	1.1 (3aa)	2.9 (8aa)	1.1 (3aa)	4 (11aa)	6.1 (17aa)	0.4 (1aa)	3.6 (10aa)	3.2 (9aa)	3.2 (9aa)

Sequence

>PH0027 (S)-2,3-Di-O-geranylgeranylglyceryl synthase
GTGGAACCCAAGGCTTTCGTTGAGATTATGAGACCCCACAACTGCATCCTAGCAGGGATC
GTTGGGATACTAGGTAGCTTAGTTGCCTACGAAGGTATCCCCCCTGTTCAAAAATTGATC
CTCATATTCCTGGTCGTCTACTTCGGTTGCTCAGCAGGGAATACAATAAATGACTACTTC
GATGTTGAGATTGACAAGATCAATAGGCCTAATAGGCCGATACCAAGGGGGGCTATTACA
AGGAAAGCGGCTTTTTACTATGGAGTGCTCCAATACTTCATTGGCCTAATAATTGCACTC
CTCCTTGGATGGAGTGCATTTCTCTTCGCCCTGGGAGCTTACTTTCTAACGTTCGTATAT
GCCTGGAAGCTTAAGCCACTTCCATTCATAGGGAACGTCACTGTGGCACTGCTAACGGCC
GCTACCCCAATTTACGGAGCAGTTGGTGTTGGAAGAATTGACCTAGCCGGATACTTGGCG
ATTTGCGCATTCTTAGTTAACGTTTCCAGGGAGATAATGAAGGATATAGAAGACTTCGAA
GGGGATAAAAGACTCGGAGCAAGGACACTACCCATAATGATTGGTAAAAAGAAGTCCGGA
ATTATAGCATCGATTTTCGGATTTTTAACTATAATATCCTCGTTCCTACCCGTTAAGGTT
GGAATAGGACTTGGTTATCTCCCGATAATTATCGTTGACATTATGATAGCAAAAGCGAGC
ATTGACGTACTAGTTAATCCCGAGAAGGCCGGAAAAGGACAGAAAATTTTGAAGTTTGCT
ACATTCATAGCAGTTATAAGCTTCCTATTAGGAGCATTAACTAGGGAGGTGTGA


>PH0027 (S)-2,3-Di-O-geranylgeranylglyceryl synthase
MEPKAFVEIMRPHNCILAGIVGILGSLVAYEGIPPVQKLILIFLVVYFGCSAGNTINDYF
DVEIDKINRPNRPIPRGAITRKAAFYYGVLQYFIGLIIALLLGWSAFLFALGAYFLTFVY
AWKLKPLPFIGNVTVALLTAATPIYGAVGVGRIDLAGYLAICAFLVNVSREIMKDIEDFE
GDKRLGARTLPIMIGKKKSGIIASIFGFLTIISSFLPVKVGIGLGYLPIIIVDIMIAKAS
IDVLVNPEKAGKGQKILKFATFIAVISFLLGALTREV