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CDS Information : PH0027a

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Pyrococcus horikoshii OT3T (= NBRC 100139T) chromosome

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Overview 
Genome

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Organism Pyrococcus horikoshii OT3T (= NBRC 100139T)
Replicon chromosome
Start / Stop / Direction 27,507 / 27,884 / +
Location 27507..27884
Type CDS
Length 378 bp (125 aa)

close this sectionAnnotation

Product hypothetical protein
Gene name
Functional category Unclassified
- Similar to unknown protein
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Pyrococcus abyssi GE5Pyrococcus furiosus DSM 3638Thermococcus kodakaraensis KOD1
[35] PAB0019 6e-58(214)
hypothetical protein
[2015] PF1962 1e-55(206)
hypothetical protein
[1958] TK1958 1e-47(180)
hypothetical protein

close this sectionRelated links to external database

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=1e-54Q9V2P4_PYRABPutative uncharacterized proteinAlignment
2E=2e-52Q8TZM8_PYRFUPutative uncharacterized protein PF1962Alignment
3E=2e-44Q5JDN4_PYRKOPutative uncharacterized proteinAlignment
4E=3e-20Q9UZ11_PYRABPutative uncharacterized proteinAlignment
5E=6e-18Q8U2A5_PYRFUPutative uncharacterized protein PF0934Alignment
HAMAP No significant hit
InterPro No significant hit
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 125 amino acids
molecular mass 14,903.22 Da
pI 4.89
aa composition
AlaValLeuIlePheTrpProMetGlySer
4
(5aa)		4
(5aa)		7.2
(9aa)		13.6
(17aa)		4
(5aa)		4
(5aa)		4.8
(6aa)		1.6
(2aa)		4.8
(6aa)		2.4
(3aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
7.2
(9aa)		0
(0aa)		3.2
(4aa)		1.6
(2aa)		3.2
(4aa)		8.8
(11aa)		0
(0aa)		7.2
(9aa)		4.8
(6aa)		13.6
(17aa)

open this sectionSequence