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CDS Information : PH0047

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Pyrococcus horikoshii OT3T (= NBRC 100139T) chromosome

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Overview 
Genome

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Organism Pyrococcus horikoshii OT3T (= NBRC 100139T)
Replicon chromosome
Start / Stop / Direction 42,756 / 42,388 / -
Location complement(42388..42756)
Type CDS
Length 369 bp (122 aa)

close this sectionAnnotation

Product conserved hypothetical protein
Gene name
Functional category Unclassified
- Similar to unknown protein
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Pyrococcus abyssi GE5Pyrococcus furiosus DSM 3638Thermococcus kodakaraensis KOD1
[64] PAB2310 3e-69(252)
hypothetical protein
[56] PF0056 1e-70(256)
putative carbohydrate binding protein
[2063] TK2063 4e-47(178)
hypothetical protein

close this sectionRelated links to external database

UniProtO57816
INSDBAA29115.1 (DDBJ GenBank EMBL)
RefSeqNP_142066.1
GI14590002
GeneID1443946
UniParcUPI0000062CE3

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=1e-70O57816_PYRHOPutative uncharacterized protein PH0047Alignment
2E=3e-67Q8U4M5_PYRFUPutative carbohydrate binding proteinAlignment
3E=5e-66Q9V2L8_PYRABPutative uncharacterized proteinAlignment
4E=7e-44Q5JHX2_PYRKOPutative uncharacterized proteinAlignment
5E=2e-20A3DL47_STAMFCupin 2, conserved barrel domain proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR011051 Cupin, RmlC-type (Domain)
 [1-107]  3e-26 SSF51182
SSF51182   RmlC_like_cupin
IPR013096 Cupin 2, conserved barrel (Domain)
 [38-108]  1.29999924468183e-16 PF07883
PF07883   Cupin_2
IPR014710 RmlC-like jelly roll fold (Domain)
 [1-114]  3.30000526807179e-32 G3DSA:2.60.120.10
G3DSA:2.60.120.10   RmlC-like_jellyroll
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 122 amino acids
molecular mass 14,133.09 Da
pI 6.35
aa composition
AlaValLeuIlePheTrpProMetGlySer
4.1
(5aa)		7.4
(9aa)		2.5
(3aa)		9
(11aa)		4.9
(6aa)		3.3
(4aa)		8.2
(10aa)		1.6
(2aa)		8.2
(10aa)		2.5
(3aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.1
(5aa)		0.8
(1aa)		4.1
(5aa)		1.6
(2aa)		4.9
(6aa)		10.7
(13aa)		4.1
(5aa)		2.5
(3aa)		5.7
(7aa)		9.8
(12aa)

open this sectionSequence