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CDS Information : PH0054.1

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close this sectionGenomic map

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Pyrococcus horikoshii OT3T (= NBRC 100139T) chromosome

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Overview 
Genome

close this sectionLocation

Organism Pyrococcus horikoshii OT3T (= NBRC 100139T)
Replicon chromosome
Start / Stop / Direction 48,533 / 47,556 / -
Location complement(47556..48533)
Type CDS
Length 978 bp (325 aa)

close this sectionAnnotation

Product putative 1-aminocyclopropane-1-carboxylate deaminase
Gene name
Functional category Metabolism
- Amino Acid Metabolism
EC number 3.5.99.7
Note
KEGG pathway
Sequence feature

54 (a.a.)BINDING
References Uniprot:P76316 Pubmed:11527960,3908101
DOGAN:PH0054.1 Pubmed:15328614
Uniprot:Q00740 Pubmed:1885510

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Pyrococcus abyssi GE5Pyrococcus furiosus DSM 3638Thermococcus kodakaraensis KOD1
[70] PAB2303 3e-123(433)
1-aminocyclopropane-1-carboxylate deaminase (EC:4.4.1.15)
[10] PF0010 2e-138(483)
1-aminocyclopropane-1-carboxylate deaminase (EC:4.4.1.15)

close this sectionRelated links to external database

UniProtO57809
INSDBAA29122.1 (DDBJ GenBank EMBL) : N-term changed (+9)
RefSeqNP_142071.1 : N-term changed (+9)
GI14590007 : N-term changed (+9)
GeneID1443951 : N-term changed (+9)
UniParcUPI0000124E3D

close this sectionComputational search results

BLASTP
Database:UniProtKB:12.5
1E=01A1D_PYRHOPutative 1-aminocyclopropane-1-carboxylate deaminase
ACC deaminase		Alignment
2E=1e-1451A1D_PYRFUPutative 1-aminocyclopropane-1-carboxylate deaminase
ACC deaminase		Alignment
3E=1e-1281A1D_PYRABPutative 1-aminocyclopropane-1-carboxylate deaminase
ACC deaminase		Alignment
4E=1e-58A4VM03_PSEU5Pyridoxal phosphate-dependent deaminase, putativeAlignment
5E=2e-58A4XTV5_PSEMEPyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase familyAlignment
HAMAP No significant hit
InterPro
Database:interpro:16.0
IPR001926 Pyridoxal phosphate-dependent enzyme, beta subunit (Domain)
 [15-310]  4.19999771339582e-05 PF00291
PF00291   PALP
 [7-321]  4.3e-76 SSF53686
SSF53686   SSF53686
IPR005966 Pyridoxal phosphate-dependent deaminase (Family)
 [15-321]  TIGR01275
TIGR01275   ACC_deam_rel
SignalP 
 [1-17]  0.528 Signal
Eukaryota   
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 325 amino acids
molecular mass 35,187.91 Da
pI 6.7
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.7
(25aa)		7.7
(25aa)		12.3
(40aa)		8.9
(29aa)		3.1
(10aa)		0.3
(1aa)		3.7
(12aa)		1.2
(4aa)		12.6
(41aa)		4.3
(14aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.3
(14aa)		0
(0aa)		1.8
(6aa)		0.9
(3aa)		4.3
(14aa)		7.7
(25aa)		1.5
(5aa)		4.6
(15aa)		4.9
(16aa)		8
(26aa)

open this sectionSequence