CDS Information : RER_00130

Display	1000bp 10000bp 100000bp Clone

Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon	chromosome
Start / Stop / Direction	18,031 / 19,695 / +
Location	18031..19695
Type	CDS
Length	1,665 bp (554 aa)

Product	conserved hypothetical membrane protein
Gene name
Functional category	Unclassified - hypothetical protein
EC number
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:14.0 show BLAST table	1 E=1e-123 Q5Z2C2_NOCFA Putative uncharacterized protein Alignment 2 E=1e-122 Q0S765_RHOSR Putative uncharacterized protein Alignment 3 E=1e-122 B1MMN3_MYCAB Putative uncharacterized protein Alignment 4 E=1e-120 A1TE57_MYCVP Putative uncharacterized protein Alignment 5 E=1e-120 Q1B4C2_MYCSS Putative uncharacterized protein Alignment
HAMAP	No significant hit
InterPro	No significant hit
SignalP	No significant hit
TMHMM	Transmembrane 5
SOSUI	Transmembrane 5

size of protein	554 amino acids
molecular mass	60,982.61 Da
pI	4.59
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 10.3 (57aa) 7.8 (43aa) 10.3 (57aa) 5.2 (29aa) 4.3 (24aa) 4.3 (24aa) 5.2 (29aa) 2.3 (13aa) 9 (50aa) 6.1 (34aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.3 (35aa) 0.4 (2aa) 2.3 (13aa) 3.1 (17aa) 2.2 (12aa) 2.7 (15aa) 1.1 (6aa) 5.4 (30aa) 6.1 (34aa) 5.4 (30aa)

>RER_00130 conserved hypothetical membrane protein
ATGAAACGTGTGTGGGAACGGCTGCGCCTCTACTGCAAGACGCTGCACCCGGTCGGGCTT
GCCTTTGCTCTGGTCTTCTTCACCTGGTCGATGAGTCCGTCCCTGTTGCCGCGCGCCTGG
TACTTGCAGGGCGTTGCGACGGGCATCTCGCTCGCGATGGGATACGGCGTCGGCGTGACG
GTTGCCTGGATGATCCGCAAGTGCGGCGTCGAACCGCAGTGGTCGGATCGCACCAAGAAG
ATCGGCTGGCGAGTCTTGTTGGCCGCGGCCGTCATTCTGGTTCCGACGTTCTTGGTCCTC
GGTTCGTGGTGGCAGCAGATCGTTCGCGATCTTGTCGAAGCTCCTCGCACCAATCAGGCG
AATTACCTTCTGGTGCTGCTGATTGCGCTCGGAATCTGGTTCATCCTGCTCGAGGCAGGC
CGTGGTCTTCGTTTCACCACCAACAAGCTCACCGCCGTCGCACTTCGGTTCGTTCCCCTC
GAAGCGGCGAAGGTCGGCAGCTTGATCGTCATCTTCGCCCTCGGCATCTTCATTGTGAAC
GGTGCGCTGTACAACGGGTTGATTGCCTTCGCGAACTGGAGTTTCTCCGGTGCAGATCAT
GAAACACCGGACGGCATCGAACAACCCTTGATCGCTGAGCGCAGTGGTTCACCGATGTCC
GCGGAGGCCTGGGATTCGCTCGGCCAGGAGGGGCGCACCTTCATGGGCAGCGGTCCCACC
GCGGCCGAGATCACCGCGTTGACCGGACGTGAAGCGAAGCAACCGATCCGGGTGTACGCG
GGACGCGAATCCTCGGACTCGATCAACGGTGTCGCACAGCGGGTCGTCGACGAGTTGGAG
CGCACCGGCGGATTCGACCGCGGAACCCTCGCAGTTGTCACGACCACCGGCCGCGGTTGG
GTGAACGAGGACGTCGCGTCGGCGTTCGAGTACGTCGAGGGCGGGGACACGGCGATCGCG
TCGATGCAGTACTCGTTCCTTCCGAGTCCGTTGGCCTTCATCGCCGACCGTGAGACGCCG
ATGATTGCCGGTCGCGCACTCTTCAACGCGGTGTACGCCAAGTGGATCGACCTGCCCGTG
GAGACGCGACCCGAGCTGGTTGTCTTCGGTGAGAGCCTCGGCTCCTACGGTGGCCAGGCC
GCATTTGCCGGCGCTCAGGACATGATGACGCGCGTCGACGGCGCACTGTGGGTCGGAACC
CCCAACTTCACTGCTCAGTGGCAGGAAATCACGGACAGCCGCGACTCGGGCTCACCGGAG
ATCCTGCCGGTGATCGACGGTGGCCAGGCAATTCGGTTTGCCGGTGATCCGGAAGATCTG
GAGCTGAAGTCCGACTGGGACGACGATCGCATCGTGTACTGGCAGCACGCCAGCGACCCG
ATCACATGGTGGTCCTTCGACCTGCTGCTCAACAAGCCGGATTGGCTCAAGGAACCGCTG
GGTCGCGACGTGGATCCGGGAATGACGTGGGTACCTCTCGTGACCTTCTGGCAGGTAACC
CTCGACATGGTCTTCTCGGCTGACGTCCCGTCCGGGCACGGTCACAATTACGGCGAGGAT
GCAGCGGACATGTGGGCCAAGATCCTGCACCCCGAGGCCTGGACCTCGGCTGATACCGAC
AAGCTTCGTTCGCTGCTGACCTCCAATCTGGAGCCCACGAAGTAG


>RER_00130 conserved hypothetical membrane protein
MKRVWERLRLYCKTLHPVGLAFALVFFTWSMSPSLLPRAWYLQGVATGISLAMGYGVGVT
VAWMIRKCGVEPQWSDRTKKIGWRVLLAAAVILVPTFLVLGSWWQQIVRDLVEAPRTNQA
NYLLVLLIALGIWFILLEAGRGLRFTTNKLTAVALRFVPLEAAKVGSLIVIFALGIFIVN
GALYNGLIAFANWSFSGADHETPDGIEQPLIAERSGSPMSAEAWDSLGQEGRTFMGSGPT
AAEITALTGREAKQPIRVYAGRESSDSINGVAQRVVDELERTGGFDRGTLAVVTTTGRGW
VNEDVASAFEYVEGGDTAIASMQYSFLPSPLAFIADRETPMIAGRALFNAVYAKWIDLPV
ETRPELVVFGESLGSYGGQAAFAGAQDMMTRVDGALWVGTPNFTAQWQEITDSRDSGSPE
ILPVIDGGQAIRFAGDPEDLELKSDWDDDRIVYWQHASDPITWWSFDLLLNKPDWLKEPL
GRDVDPGMTWVPLVTFWQVTLDMVFSADVPSGHGHNYGEDAADMWAKILHPEAWTSADTD
KLRSLLTSNLEPTK

NBRC No.	clone name	start	stop	length(bp)
G12-001-001	REGR1S8006A03	998	41,244	40,247
G12-001-255	REGR1S7004B04	6,498,939	21,873	39,245

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.