CDS Information : RER_00150

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Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon	chromosome
Start / Stop / Direction	20,488 / 21,099 / +
Location	20488..21099
Type	CDS
Length	612 bp (203 aa)

Product	putative hydrolase (fragment)
Gene name
Functional category	Unclassified - putative function (general)
EC number
Note	This ORF may be a truncated form of gene encoding hydrolase because of a point mutation. Similar to the C-terminal region of the lipase 2 of Candida parapsilosis (Q8NIN8).
KEGG pathway
Sequence feature
References	Uniprot:Q8NIN8 Pubmed:11895444

BLASTP Database:UniProtKB:14.0 show BLAST table	1 E=4e-44 Q5YRQ8_NOCFA Putative lipase Alignment 2 E=8e-43 A1UCL0_MYCSK Triacylglycerol lipase precursor Alignment 3 E=8e-43 Q1BCD4_MYCSS Triacylglycerol lipase precursor Alignment 4 E=8e-43 A3PW99_MYCSJ Triacylglycerol lipase precursor Alignment 5 E=4e-42 Q9L181_STRCO Putative secreted protein Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR005152 Secretory lipase (Family) PF03583   LIP
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	203 amino acids
molecular mass	21,617.53 Da
pI	4.46
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 10.3 (21aa) 5.9 (12aa) 9.9 (20aa) 5.4 (11aa) 3.4 (7aa) 0.5 (1aa) 8.4 (17aa) 2.5 (5aa) 9.4 (19aa) 6.4 (13aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.9 (10aa) 1.5 (3aa) 4.4 (9aa) 7.9 (16aa) 3 (6aa) 3 (6aa) 1 (2aa) 3 (6aa) 4.9 (10aa) 4.4 (9aa)

>RER_00150 putative hydrolase (fragment)
TTGAAGCCGTCGTATGCTCCCGAGCTTGATCTCAAGGGCACGTATGCAGGCGCTCCGCCC
GCCGATCTGGCGGCGACGCTGCAGCAGGTCGACGGCACGTTCCTCACCGGAGTGATCGGC
TACGCGCTCAACGGGATCCTTGCGCAGTACCCCGAGGTTCAGCCGCTGCTCGACGCCGAG
ATCAACGATCGCGGCCGACAGATGTTGGCCGCCACCAAGAACCAGTGCGTCGCCGAAAGT
GGATTGCAGTTCGGCTTCCAGCAGTCGTCGAGTTTCACCAATTCCGGTGAATCACTCTCC
GCAGTTCTGGCGCGTCTACCCATGGCGCAGGCAATCCTCGACGAGCAGAAGATCGGCAAG
CTGACGCCGGAGTCGCCCGTGCTCATTCAGCATGGCCGCTCCGATGACATCGTTCCGTTC
GGCCAGGGACAGCAGCTGGCGCGAGACTGGTGCGGCAAGGGTGCGACGGTGCAGTTCTCC
GTCAACGAACTGCCCCCGATCATTCCGGGCATGGCAATCAATCATGCAACGCCGTACCTG
GTGGGTACCCCGGAATCCGTCGGGTACATGATCGATCGCTTCAACAACGTCCCAGCACCG
TCCAACTGCTGA


>RER_00150 putative hydrolase (fragment)
MKPSYAPELDLKGTYAGAPPADLAATLQQVDGTFLTGVIGYALNGILAQYPEVQPLLDAE
INDRGRQMLAATKNQCVAESGLQFGFQQSSSFTNSGESLSAVLARLPMAQAILDEQKIGK
LTPESPVLIQHGRSDDIVPFGQGQQLARDWCGKGATVQFSVNELPPIIPGMAINHATPYL
VGTPESVGYMIDRFNNVPAPSNC

NBRC No.	clone name	start	stop	length(bp)
G12-001-001	REGR1S8006A03	998	41,244	40,247
G12-001-255	REGR1S7004B04	6,498,939	21,873	39,245

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.