CDS Information : RER_04720

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Rhodococcus erythropolis PR4 (= NBRC 100887) chromosome	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Rhodococcus erythropolis PR4 (= NBRC 100887)
Replicon	chromosome
Start / Stop / Direction	524,876 / 525,328 / +
Location	524876..525328
Type	CDS
Length	453 bp (150 aa)

Product	putative 2-aminomuconate deaminase
Gene name
Functional category	Metabolism - Amino Acid Metabolism
EC number	3.5.99.5
Note
KEGG pathway	map:00380
Sequence feature
References	Uniprot:Q9AH27 Pubmed:10633088 Uniprot:Q9KWS2 Pubmed:11081795

BLASTP Database:UniProtKB:14.0 show BLAST table	1 E=4e-49 A4XAK5_SALTO Endoribonuclease L-PSP Alignment 2 E=4e-49 A8M1M8_SALAI Endoribonuclease L-PSP Alignment 3 E=2e-48 Q1LCQ6_RALME Endoribonuclease L-PSP Alignment 4 E=4e-48 Q83V27_PSEFL 2-aminomuconate deaminase Alignment 5 E=6e-48 Q26FT6_9BACT 2-aminomuconate deaminase Alignment
HAMAP	No significant hit
InterPro Database:interpro:18.0	IPR006175 Endoribonuclease L-PSP (Domain) PF01042   Ribonuc_L-PSP IPR006175 Endoribonuclease L-PSP (Family) PTHR11803   TRANSLATION INITIATION INHIBITOR PF01042   Ribonuc_L-PSP IPR013813 Endoribonuclease L-PSP/chorismate mutase-like (Domain) G3DSA:3.30.1330.40   no description SSF55298   YjgF-like
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	150 amino acids
molecular mass	16,136.11 Da
pI	4.63
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 9.3 (14aa) 12.7 (19aa) 6.7 (10aa) 4.7 (7aa) 3.3 (5aa) 0 (0aa) 4.7 (7aa) 2 (3aa) 8 (12aa) 8 (12aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 6.7 (10aa) 0 (0aa) 4 (6aa) 2.7 (4aa) 3.3 (5aa) 3.3 (5aa) 2.7 (4aa) 4.7 (7aa) 5.3 (8aa) 8 (12aa)

>RER_04720 putative 2-aminomuconate deaminase
ATGAGTGGGGCGCAGGTCATCGAGAAGCTGGCGAAGCCGCGCGGAAAGTTCCCCCACGTC
AAGGTGGTCGGCGATTTCGTCTATGTCTCCGGGACCAGTTCGCGTCGACCCGACAACACG
TTTGTCGGCGTCGAGGTCGACGAGATGGGGACGACGGCGCTCGACATTCGGGCGCAGACG
CGTGCCGTCATCGAAAACATCGCGGCAATCCTCGCCGAAGTGGGTGGAGAACTCAGTGAT
CTGGTTCAGGTCACCTCCTACCTGGTGTCCATGAACGACTTCGGTGGATACAACGAGGTG
TACGCCGAACTGTTCGACGAAAACGGTCCGACGAGAACGACTGTGGCTGTTCACCAACTG
CCCCACCCGCATCTGCTCATCGAAATTTCCGGCGTGGCGTACGTGCCCGCCTCCAAGCGC
TCAGCGTCCGAAGATACGGAGAATGCATCATGA


>RER_04720 putative 2-aminomuconate deaminase
MSGAQVIEKLAKPRGKFPHVKVVGDFVYVSGTSSRRPDNTFVGVEVDEMGTTALDIRAQT
RAVIENIAAILAEVGGELSDLVQVTSYLVSMNDFGGYNEVYAELFDENGPTRTTVAVHQL
PHPHLLIEISGVAYVPASKRSASEDTENAS

NBRC No.	clone name	start	stop	length(bp)
G12-001-021	REGR1S7002F03	502,408	545,652	43,245
G12-001-022	REGR1S7020A09	522,074	563,695	41,622

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.